Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC85AQ96PX6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 MIR450A1-201ENST00000362262 91 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 Y_RNA.267-201ENST00000364679 109 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 SNORA9.2-201ENST00000365361 133 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 EDDM3CP-201ENST00000415977 425 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 FTH1P12-201ENST00000432137 551 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 Y_RNA.666-201ENST00000516187 112 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 AC068657.1-201ENST00000520807 306 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 AC007012.1-201ENST00000567192 175 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 uc_338.28-201ENST00000612082 187 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 AL137067.1-201ENST00000615933 120 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 MIR338-201ENST00000636369 67 ntBASIC3.57□□□□□ -1.84
CCDC85AQ96PX6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 AC062016.1-201ENST00000355719 319 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 RNU1-112P-201ENST00000364401 164 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 RNA5SP274-201ENST00000410484 108 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 SRIP3-201ENST00000413200 219 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 AC006539.3-201ENST00000454258 129 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 RN7SL633P-201ENST00000488974 297 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 Y_RNA.677-201ENST00000516401 85 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 RNA5SP380-201ENST00000517190 98 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 AP002004.2-201ENST00000531656 154 ntBASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC85AQ96PX6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 RNU6-1107P-201ENST00000364817 104 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 MIR627-201ENST00000384979 97 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 SNORD77.3-201ENST00000391113 65 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 RNA5SP467-201ENST00000391274 118 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 MIR887-201ENST00000401258 79 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 AL109933.2-201ENST00000452651 260 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 RN7SL636P-201ENST00000497504 294 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 RNU6-1041P-201ENST00000516254 102 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 RNU6-537P-201ENST00000517277 103 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 AC024995.1-201ENST00000523014 93 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 AC022217.4-201ENST00000604389 163 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 AC106754.2-201ENST00000623006 233 ntBASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CCDC85AQ96PX6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 Y_RNA.410-201ENST00000383992 113 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 RNU6-106P-201ENST00000384405 107 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 MIR548A2-201ENST00000384956 97 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 RNA5SP323-201ENST00000391094 133 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 RNA5SP492-201ENST00000411330 114 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 CALM2P4-201ENST00000430810 426 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 RNU1-131P-201ENST00000458943 161 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 SNORD109B-201ENST00000458961 67 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 SNORD109A-201ENST00000459128 67 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 AL049830.1-201ENST00000468034 425 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 RNA5SP385-201ENST00000515947 110 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 SCARNA15-202ENST00000516881 127 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 RNU6-667P-201ENST00000517186 102 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 AC091544.4-201ENST00000555268 342 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 MIR5582-201ENST00000579697 68 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 MIR5197-201ENST00000583721 112 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 AL591926.4-201ENST00000616895 298 ntBASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC85AQ96PX6 Y_RNA.85-201ENST00000363014 111 ntBASIC3.53□□□□□ -1.84
CCDC85AQ96PX6 Y_RNA.99-201ENST00000363138 105 ntBASIC3.53□□□□□ -1.84
CCDC85AQ96PX6 RNU6-851P-201ENST00000384565 107 ntBASIC3.53□□□□□ -1.84
CCDC85AQ96PX6 MIR592-201ENST00000384959 97 ntBASIC3.53□□□□□ -1.84
CCDC85AQ96PX6 AC134878.1-201ENST00000619901 243 ntBASIC3.53□□□□□ -1.84
CCDC85AQ96PX6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC85AQ96PX6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 Y_RNA.369-201ENST00000365568 117 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 SNORA46-201ENST00000384762 135 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 MIR518F-201ENST00000384973 87 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 MIR522-201ENST00000385071 87 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 SNORD12C-201ENST00000386307 89 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 RNA5SP184-201ENST00000411071 108 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 RPS26P48-201ENST00000491713 339 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 MIR3616-201ENST00000584070 92 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 MIR4506-201ENST00000584693 77 ntBASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC85AQ96PX6 AC093010.3-201ENST00000570269 15214 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 RNA5SP383-201ENST00000362934 120 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 RNA5SP126-201ENST00000365092 109 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 U8.9-201ENST00000365667 134 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 RNU6-442P-201ENST00000383968 104 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 ATP5J2P3-201ENST00000451550 258 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 U6.108-201ENST00000637764 58 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.51□□□□□ -1.85
CCDC85AQ96PX6 Y_RNA.49-201ENST00000362714 112 ntBASIC3.5□□□□□ -1.85
CCDC85AQ96PX6 Y_RNA.366-201ENST00000365540 102 ntBASIC3.5□□□□□ -1.85
CCDC85AQ96PX6 SNORA8-201ENST00000384574 139 ntBASIC3.5□□□□□ -1.85
CCDC85AQ96PX6 SNORA26.7-201ENST00000391288 122 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms