Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL035461.1-201ENST00000421490 332 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 AC087499.2-201ENST00000432861 149 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 AL049830.1-201ENST00000468034 425 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 RNA5SP76-201ENST00000516277 87 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 RNU6-919P-201ENST00000516731 104 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 RNU1-104P-201ENST00000517280 175 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 MIR3121-201ENST00000579680 77 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.65□□□□□ -1.98
PTCHD1Q96NR3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 RNU6-23P-201ENST00000363283 107 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 RNU1-109P-201ENST00000383960 147 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 RNU6-1056P-201ENST00000383996 107 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 AL158147.1-201ENST00000443970 75 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 AL049873.1-201ENST00000480540 376 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 Y_RNA.690-201ENST00000516603 95 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 RNU2-60P-201ENST00000517290 128 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 AC026271.5-201ENST00000577873 130 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 MIR3169-201ENST00000578032 83 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 AC087685.1-201ENST00000587507 141 ntBASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTCHD1Q96NR3 AL136360.1-201ENST00000503377 1900 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 Y_RNA.52-201ENST00000362760 96 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 Y_RNA.114-201ENST00000363265 113 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 Y_RNA.280-201ENST00000364765 112 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 RNU6-44P-201ENST00000384045 107 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 SNORA1-201ENST00000384107 130 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 TRBV12-1-201ENST00000479785 344 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 AC096725.1-201ENST00000514266 313 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 RNU6-772P-201ENST00000516042 105 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 MIR3129-201ENST00000581095 76 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 ELOCP29-201ENST00000588193 334 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 AL033523.1-201ENST00000605153 153 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 AL161431.1-201ENST00000618966 4205 ntBASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.64□□□□□ -1.99
PTCHD1Q96NR3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 SNORD115-3-201ENST00000363100 82 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 SNORD24-201ENST00000383884 75 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 SNORD61-201ENST00000384252 73 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 MIR522-201ENST00000385071 87 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 MIR891A-201ENST00000401237 79 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 FTH1P12-201ENST00000432137 551 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 AC099677.2-201ENST00000436385 175 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 RPS29P6-201ENST00000438196 145 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 AL109933.2-201ENST00000452651 260 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 AC022217.4-201ENST00000604389 163 ntBASIC2.63□□□□□ -1.99
PTCHD1Q96NR3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 RNU6-888P-201ENST00000363010 101 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 SNORA38-201ENST00000363946 132 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 RNU6-1064P-201ENST00000410626 104 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 AC105272.1-201ENST00000438604 198 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 RNU5E-3P-201ENST00000515913 68 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 CYCSP26-201ENST00000534107 320 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 GTF3AP2-201ENST00000557014 266 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 MIR3914-2-201ENST00000637339 95 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
PTCHD1Q96NR3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 SNORD68-201ENST00000363214 84 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 RNU6-508P-201ENST00000363231 103 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 SNORA5B-201ENST00000363786 132 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 RNU6-309P-201ENST00000364573 106 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 RNU6-693P-201ENST00000516134 107 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 RNU6-826P-201ENST00000516827 104 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 AC091544.4-201ENST00000555268 342 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 AC133485.4-201ENST00000561835 220 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 AC138907.4-201ENST00000570107 226 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 MIR4513-201ENST00000581077 86 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 AC022202.1-201ENST00000613515 211 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 CTSLP2-204ENST00000629029 392 ntBASIC2.61□□□□□ -1.99
PTCHD1Q96NR3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 295.9 ms