Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF20Q5VTR2 SNORD73B-201ENST00000364394 72 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 RNU6-690P-201ENST00000365242 106 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 MIR181B1-201ENST00000385240 110 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 AL353689.1-201ENST00000438895 199 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.53□□□□□ -1.84
RNF20Q5VTR2 BX510359.1-201ENST00000456973 237 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 AC018868.1-201ENST00000491307 315 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 AL358944.1-201ENST00000528537 144 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF20Q5VTR2 AL589743.1-201ENST00000551932 2712 ntBASIC3.53□□□□□ -1.84
RNF20Q5VTR2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RNF20Q5VTR2 AC108206.1-201ENST00000570186 4159 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF20Q5VTR2 RNU6-1084P-201ENST00000362498 107 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 RNU6-1131P-201ENST00000364955 107 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 SNORA9.2-201ENST00000365361 133 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 RNU7-25P-201ENST00000516544 62 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 RNY4P20-201ENST00000516678 93 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 AP002004.2-201ENST00000531656 154 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 AC134878.1-201ENST00000619901 243 ntBASIC3.52□□□□□ -1.85
RNF20Q5VTR2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF20Q5VTR2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 RNU6-414P-201ENST00000363705 104 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.198-201ENST00000364013 98 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 U8.6-201ENST00000364939 135 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 RNU6-1189P-201ENST00000383958 107 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 TRBV12-1-201ENST00000479785 344 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 AP004217.1-201ENST00000480579 346 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 RPS26P48-201ENST00000491713 339 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 RNA5SP281-201ENST00000516504 135 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 AC004486.1-201ENST00000546846 233 ntBASIC3.51□□□□□ -1.85
RNF20Q5VTR2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF20Q5VTR2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF20Q5VTR2 MIR208A-201ENST00000362287 71 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.49-201ENST00000362714 112 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 RNA5SP374-201ENST00000362939 125 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 SNORD14E-201ENST00000364009 85 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 RNU6-294P-201ENST00000364999 102 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 RNU6-220P-201ENST00000390919 107 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF20Q5VTR2 ATP5J2P3-201ENST00000451550 258 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 AL163195.1-201ENST00000496941 348 ntBASIC3.5□□□□□ -1.85
RNF20Q5VTR2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF20Q5VTR2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RNF20Q5VTR2 MIR422A-201ENST00000362286 90 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.362-201ENST00000365518 110 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.410-201ENST00000383992 113 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 RNU6-851P-201ENST00000384565 107 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RNF20Q5VTR2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 MIR1302-4-201ENST00000408701 150 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.49□□□□□ -1.85
RNF20Q5VTR2 RNU7-70P-201ENST00000516941 66 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 AL353149.1-201ENST00000610667 244 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.49□□□□□ -1.85
RNF20Q5VTR2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.49□□□□□ -1.85
RNF20Q5VTR2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RNF20Q5VTR2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF20Q5VTR2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF20Q5VTR2 RNY4P6-201ENST00000363667 96 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 SNORD115-28-201ENST00000363931 81 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.213-201ENST00000364178 111 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 RNU6-442P-201ENST00000383968 104 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 MT-TI-201ENST00000387365 69 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 SNORD36C-201ENST00000516733 66 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 AC021443.1-201ENST00000604478 211 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 AC007179.3-201ENST00000604976 235 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 AC006441.5-201ENST00000612680 209 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.48□□□□□ -1.85
RNF20Q5VTR2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.37-201ENST00000362606 108 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-268P-201ENST00000364174 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.323-201ENST00000365157 109 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 SNORA25B-201ENST00000365507 128 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-49P-201ENST00000384256 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 Y_RNA.547-201ENST00000384654 119 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-1072P-201ENST00000384703 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-443P-201ENST00000384780 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 MIR759-201ENST00000390224 91 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-440P-201ENST00000390882 105 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 SNORD88.1-201ENST00000408684 91 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 AC022018.1-201ENST00000430685 241 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU7-94P-201ENST00000459576 63 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RN7SL499P-201ENST00000481141 276 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-830P-201ENST00000516353 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-109P-201ENST00000516364 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 SNORA40.13-201ENST00000516379 120 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RNU6-184P-201ENST00000516514 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 SUMO2P16-201ENST00000519475 264 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms