Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
ZNF394Q53GI3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
ZNF394Q53GI3 RNU6-131P-201ENST00000391144 107 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 RNA5SP184-201ENST00000411071 108 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 AL392103.1-201ENST00000447000 198 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 SNRPGP8-201ENST00000454064 226 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 RNU7-200P-201ENST00000516105 62 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 RNU6-197P-201ENST00000516680 100 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 RNU7-193P-201ENST00000516723 65 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 SUB1P4-201ENST00000566062 339 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 MIR4762-201ENST00000585261 75 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 AL591926.4-201ENST00000616895 298 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.77□□□□□ -1.97
ZNF394Q53GI3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
ZNF394Q53GI3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZNF394Q53GI3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ZNF394Q53GI3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF394Q53GI3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
ZNF394Q53GI3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF394Q53GI3 MIR126-201ENST00000362291 85 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 U8.5-201ENST00000364528 136 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 RNU6-484P-201ENST00000384016 107 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 RNA5SP109-201ENST00000391010 116 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 RN7SKP200-201ENST00000410564 320 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 RNA5SP501-201ENST00000410990 112 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 RNA5SP450-201ENST00000411206 102 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 AC006461.1-201ENST00000412637 326 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 FTH1P12-201ENST00000432137 551 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 RNVU1-2-201ENST00000516326 135 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 AC121758.2-201ENST00000553271 193 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 MIR8054-201ENST00000620877 86 ntBASIC2.76□□□□□ -1.97
ZNF394Q53GI3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
ZNF394Q53GI3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
ZNF394Q53GI3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF394Q53GI3 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 Y_RNA.8-201ENST00000362353 102 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 Y_RNA.398-201ENST00000383952 99 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 SNORD116-18-201ENST00000383961 92 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 AL606517.2-201ENST00000442855 241 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 RNU6-561P-201ENST00000516222 102 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 RNU7-149P-201ENST00000516739 59 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 IGLV3-17-201ENST00000519099 244 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 AC091544.4-201ENST00000555268 342 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 MIR4513-201ENST00000581077 86 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 AC097639.2-201ENST00000603159 172 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF394Q53GI3 MIR6895-201ENST00000613497 78 ntBASIC2.75□□□□□ -1.97
ZNF394Q53GI3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF394Q53GI3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.74□□□□□ -1.97
ZNF394Q53GI3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.74□□□□□ -1.97
ZNF394Q53GI3 MIR522-201ENST00000385071 87 ntBASIC2.74□□□□□ -1.97
ZNF394Q53GI3 RNU6-440P-201ENST00000390882 105 ntBASIC2.74□□□□□ -1.97
ZNF394Q53GI3 RNA5SP481-201ENST00000516814 122 ntBASIC2.74□□□□□ -1.97
ZNF394Q53GI3 RNU2-19P-201ENST00000517288 84 ntBASIC2.74□□□□□ -1.97
ZNF394Q53GI3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF394Q53GI3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF394Q53GI3 SNORA25.6-201ENST00000364121 118 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 RNU6-125P-201ENST00000384505 107 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 RNU2-70P-201ENST00000410718 179 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF394Q53GI3 RNA5SP282-201ENST00000516355 108 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF394Q53GI3 MIR3646-201ENST00000578301 84 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 MIR3133-201ENST00000583157 78 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 AC008507.4-201ENST00000585464 127 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 Pinc.1-201ENST00000616452 154 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
ZNF394Q53GI3 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
ZNF394Q53GI3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ZNF394Q53GI3 AL034345.1-201ENST00000407768 123 ntBASIC2.72□□□□□ -1.97
ZNF394Q53GI3 RNU2-7P-201ENST00000410794 178 ntBASIC2.72□□□□□ -1.97
ZNF394Q53GI3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
ZNF394Q53GI3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.72□□□□□ -1.97
ZNF394Q53GI3 MIR378D2-201ENST00000580636 98 ntBASIC2.72□□□□□ -1.97
ZNF394Q53GI3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.72□□□□□ -1.97
ZNF394Q53GI3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF394Q53GI3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.72□□□□□ -1.97
ZNF394Q53GI3 SNORD68-201ENST00000363214 84 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 RNU6-112P-201ENST00000363599 104 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 SNORA6-201ENST00000384033 151 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 RPL30P13-201ENST00000418873 348 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF394Q53GI3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF394Q53GI3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF394Q53GI3 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 MTND5P41-201ENST00000517498 206 ntBASIC2.71□□□□□ -1.98
ZNF394Q53GI3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF394Q53GI3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF394Q53GI3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZNF394Q53GI3 AC008555.8-201ENST00000623602 2168 ntBASIC2.7□□□□□ -1.98
ZNF394Q53GI3 AL136360.1-201ENST00000503377 1900 ntBASIC2.7□□□□□ -1.98
ZNF394Q53GI3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ZNF394Q53GI3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms