Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 AL357134.1-201ENST00000445848 426 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 AC009237.6-201ENST00000446969 424 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 RPS20P10-201ENST00000451209 253 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 RPS26P55-201ENST00000471178 356 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 AC074198.2-201ENST00000508153 258 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 AC011406.1-201ENST00000512440 370 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 SCARNA8-201ENST00000515924 131 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 SUMO2P18-201ENST00000518873 252 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.22□□□□□ -2.21
IGKV3-11P04433 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.22□□□□□ -2.21
IGKV3-11P04433 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
IGKV3-11P04433 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
IGKV3-11P04433 SNORA25.1-201ENST00000362326 128 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU6-862P-201ENST00000362804 105 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU5F-3P-201ENST00000363767 117 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU1-96P-201ENST00000364163 162 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU6-923P-201ENST00000364753 107 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU6-407P-201ENST00000365280 104 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU6-438P-201ENST00000365561 103 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU6-1310P-201ENST00000384153 107 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 Y_RNA.489-201ENST00000384410 101 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 MIR873-201ENST00000401120 77 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 AL357139.1-201ENST00000407792 426 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 MIR1278-201ENST00000408753 81 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 MIR548H3-201ENST00000408771 118 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 MIR1298-201ENST00000408783 112 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 SRIP3-201ENST00000413200 219 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.21□□□□□ -2.22
IGKV3-11P04433 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.21□□□□□ -2.22
IGKV3-11P04433 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.21□□□□□ -2.22
IGKV3-11P04433 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU7-141P-201ENST00000459304 62 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 AC010598.1-201ENST00000510378 103 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNA5SP20-201ENST00000515976 84 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNVU1-2-201ENST00000516326 135 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 RNU6-948P-201ENST00000516374 107 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.21□□□□□ -2.22
IGKV3-11P04433 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 MIR4498-201ENST00000577599 66 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 AL162424.1-201ENST00000602325 221 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 AL442067.1-201ENST00000613261 223 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.21□□□□□ -2.22
IGKV3-11P04433 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.2□□□□□ -2.22
IGKV3-11P04433 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
IGKV3-11P04433 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
IGKV3-11P04433 AL159152.1-201ENST00000635019 2587 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RNU6-200P-201ENST00000364743 107 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RNU6-1240P-201ENST00000365155 104 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RNA5SP240-201ENST00000365355 128 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RNU6-918P-201ENST00000391219 106 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
IGKV3-11P04433 MIR548I3-201ENST00000408378 149 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 MIR548I1-201ENST00000408810 149 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RNU6-855P-201ENST00000410395 104 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AL390729.2-201ENST00000416137 156 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AC245047.4-201ENST00000433189 144 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AL353689.1-201ENST00000438895 199 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RPS4XP11-201ENST00000446897 772 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RPS27P1-201ENST00000450552 247 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 Y_RNA.638-201ENST00000459374 113 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AC010409.1-201ENST00000487382 476 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AC117454.1-201ENST00000491120 168 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
IGKV3-11P04433 AC097462.1-201ENST00000514125 324 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 RNU6-453P-201ENST00000516819 85 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AC136628.3-201ENST00000521868 290 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.2□□□□□ -2.22
IGKV3-11P04433 BX284668.6-201ENST00000606899 438 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 U6.73-201ENST00000619194 103 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 AL365265.1-201ENST00000621045 234 ntBASIC1.2□□□□□ -2.22
IGKV3-11P04433 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
IGKV3-11P04433 MIR411-201ENST00000362239 96 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 snoU2-30.2-201ENST00000362805 70 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 Y_RNA.99-201ENST00000363138 105 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 RNU6-682P-201ENST00000363843 106 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 RNU6-818P-201ENST00000364837 108 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 Y_RNA.297-201ENST00000364950 91 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 Y_RNA.478-201ENST00000384358 107 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 MIR518A2-201ENST00000384966 87 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
IGKV3-11P04433 SNORA53-201ENST00000391141 249 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 HMGN2P39-201ENST00000398005 273 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 MTCO2P33-201ENST00000402100 465 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 RNU6-383P-201ENST00000410864 94 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 AC004965.1-201ENST00000413033 213 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 EBAG9P1-201ENST00000418955 543 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
IGKV3-11P04433 RPL31P63-201ENST00000422565 375 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 MTND5P15-201ENST00000434246 349 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.19□□□□□ -2.22
IGKV3-11P04433 AC100767.1-201ENST00000528178 123 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.19□□□□□ -2.22
IGKV3-11P04433 MIR4299-201ENST00000577899 72 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 AC091178.2-201ENST00000584401 117 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 MIR4438-201ENST00000585271 93 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 AL031274.2-201ENST00000599419 203 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 AL929325.1-201ENST00000603096 117 ntBASIC1.19□□□□□ -2.22
IGKV3-11P04433 AC022217.4-201ENST00000604389 163 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms