Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 MTATP6P23-201ENST00000440153 476 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-107P-201ENST00000516643 102 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 POLR3GP1-201ENST00000594073 261 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 AC005828.6-201ENST00000606610 232 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 AC006441.5-201ENST00000612680 209 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 AC105081.1-201ENST00000617727 106 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 AC073869.9-201ENST00000641610 120 ntBASIC-1.32□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD14E-201ENST00000364009 85 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD115-32-201ENST00000364079 82 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-169P-201ENST00000365336 107 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORA24-201ENST00000384096 131 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 RPS27AP14-201ENST00000422868 454 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 SNRPGP14-201ENST00000435400 219 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU7-138P-201ENST00000459479 64 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORA25.10-201ENST00000515926 124 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORA27.4-201ENST00000516650 95 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-881P-201ENST00000516813 102 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 MTND4LP18-201ENST00000526864 291 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 BNIP3P40-201ENST00000596017 556 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 AC104010.1-201ENST00000616889 150 ntBASIC-1.33□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD95.1-201ENST00000364099 68 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 RNY1P12-201ENST00000364251 105 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU4-36P-201ENST00000364294 144 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD116.1-201ENST00000365628 92 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU6-533P-201ENST00000384144 107 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 Z95118.1-201ENST00000421372 247 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 SPINT5P-201ENST00000448174 155 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU7-167P-201ENST00000459160 62 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 RNU2-11P-201ENST00000459191 187 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 HSPE1P23-201ENST00000509838 286 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 AL136370.1-201ENST00000608166 691 ntBASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.34□□□□□ -2.62
CHKB-CPT1BH3BT56 SNORD114-7-201ENST00000362520 77 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-280P-201ENST00000364145 104 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 AC236972.2-201ENST00000434979 310 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 AC011352.1-201ENST00000512300 793 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 AC105417.1-201ENST00000514691 285 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 SCOCP1-201ENST00000554676 349 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 AC022960.3-201ENST00000619794 441 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 Z97988.1-201ENST00000637697 135 ntBASIC-1.35□□□□□ -2.63
CHKB-CPT1BH3BT56 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 SNORA20.2-201ENST00000383922 131 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-535P-201ENST00000384722 107 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-159P-201ENST00000391080 106 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 MTND1P14-201ENST00000427400 950 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 UQCRBP2-201ENST00000447827 297 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 SNORD27.1-201ENST00000516319 72 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 SNORA25.13-201ENST00000516395 103 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 AP003072.1-201ENST00000531740 145 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 AC080013.3-201ENST00000606839 578 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 uc_338.11-201ENST00000619132 160 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 AP002371.2-201ENST00000624450 503 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 AC126544.2-201ENST00000625174 749 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 U6.115-201ENST00000636045 103 ntBASIC-1.36□□□□□ -2.63
CHKB-CPT1BH3BT56 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 MTCO3P38-201ENST00000468910 766 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 AC022616.4-201ENST00000522985 181 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 PIGPP4-201ENST00000584447 307 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 SEPT14P19-203ENST00000633205 211 ntBASIC-1.37□□□□□ -2.63
CHKB-CPT1BH3BT56 AL596211.1-201ENST00000569873 2277 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-926P-201ENST00000384075 107 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-708P-201ENST00000384217 107 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 SNORD116-12-201ENST00000384468 92 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 MIR516B1-201ENST00000385211 90 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 AC108059.2-201ENST00000434626 151 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 AC016550.1-201ENST00000505348 785 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-751P-201ENST00000516382 101 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 RNA5SP480-201ENST00000516840 109 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 MIR4703-201ENST00000577728 79 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 AC064836.2-201ENST00000609491 462 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 MIR8055-201ENST00000610739 97 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.38□□□□□ -2.63
CHKB-CPT1BH3BT56 RNU6-490P-201ENST00000362985 107 ntBASIC-1.39□□□□□ -2.63
CHKB-CPT1BH3BT56 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 317.1 ms