Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 Y_RNA.226-201ENST00000364337 114 ntBASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 RNU6-818P-201ENST00000364837 108 ntBASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 MIR539-201ENST00000365690 78 ntBASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 AC022217.4-201ENST00000604389 163 ntBASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 AL591926.4-201ENST00000616895 298 ntBASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 ZNF702P-202ENST00000434269 1966 ntBASIC3.23□□□□□ -1.89
TMEM88BA6NKF7 PWAR6-201ENST00000552334 4618 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 SNORD68-201ENST00000363214 84 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 Y_RNA.338-201ENST00000365320 114 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 SNORA12.1-201ENST00000390873 148 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 Y_RNA.586-201ENST00000391146 98 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 FTH1P12-201ENST00000432137 551 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 AC120024.3-201ENST00000603167 156 ntBASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TMEM88BA6NKF7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.21□□□□□ -1.89
TMEM88BA6NKF7 RNU6-1084P-201ENST00000362498 107 ntBASIC3.21□□□□□ -1.9
TMEM88BA6NKF7 RNU6-588P-201ENST00000410281 105 ntBASIC3.21□□□□□ -1.9
TMEM88BA6NKF7 MIR5094-201ENST00000578766 85 ntBASIC3.21□□□□□ -1.9
TMEM88BA6NKF7 AC008507.4-201ENST00000585464 127 ntBASIC3.21□□□□□ -1.9
TMEM88BA6NKF7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TMEM88BA6NKF7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TMEM88BA6NKF7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
TMEM88BA6NKF7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 RNU6-978P-201ENST00000364371 103 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 Y_RNA.420-201ENST00000384043 110 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 RNU6-959P-201ENST00000384671 107 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 MIR518A2-201ENST00000384966 87 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 RNU6-257P-201ENST00000410238 98 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 NDUFA4P2-201ENST00000489989 244 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 MRPS17P9-201ENST00000511924 393 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM88BA6NKF7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 SNORD14E-201ENST00000364009 85 ntBASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 snoU2-30.1-201ENST00000365012 70 ntBASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 RNU1-51P-201ENST00000365345 176 ntBASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 Y_RNA.584-201ENST00000391090 114 ntBASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 AP001328.1-201ENST00000528550 176 ntBASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 AC084364.2-201ENST00000546924 395 ntBASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 U1.36-201ENST00000620684 176 ntBASIC3.19□□□□□ -1.9
TMEM88BA6NKF7 Y_RNA.91-201ENST00000363042 107 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 SNORD114-30-201ENST00000364448 72 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 RNU6-442P-201ENST00000383968 104 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 Y_RNA.486-201ENST00000384398 107 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 MIR522-201ENST00000385071 87 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 HMGN2P39-201ENST00000398005 273 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 RN7SKP200-201ENST00000410564 320 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 AL356320.1-201ENST00000429616 163 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 SNORA18.4-201ENST00000516440 124 ntBASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
TMEM88BA6NKF7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 SNORD114-1-201ENST00000362705 72 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 U8.5-201ENST00000364528 136 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 Y_RNA.291-201ENST00000364886 113 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 SNORD18B-201ENST00000365659 72 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 MIR597-201ENST00000384968 97 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 HMGN2P32-201ENST00000444648 269 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 MIR4762-201ENST00000585261 75 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 RMST_8.1-201ENST00000610287 165 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 U7.8-201ENST00000619968 63 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 AP001340.1-201ENST00000624405 217 ntBASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMEM88BA6NKF7 RNU1-109P-201ENST00000383960 147 ntBASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 RNU2-7P-201ENST00000410794 178 ntBASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 AC092991.1-201ENST00000477176 376 ntBASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 AC011603.4-201ENST00000611325 277 ntBASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 AC022513.1-201ENST00000624512 117 ntBASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TMEM88BA6NKF7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM88BA6NKF7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
TMEM88BA6NKF7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.15□□□□□ -1.9
TMEM88BA6NKF7 VTRNA1-1-201ENST00000363120 99 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 SNORD24-201ENST00000383884 75 ntBASIC3.15□□□□□ -1.91
TMEM88BA6NKF7 Y_RNA.542-201ENST00000384641 111 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms