Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 SUMO2P18-201ENST00000518873 252 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.86□□□□□ -2.11
NR1D1P20393 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NR1D1P20393 Y_RNA.277-201ENST00000364754 102 ntBASIC1.85□□□□□ -2.11
NR1D1P20393 Y_RNA.515-201ENST00000384535 112 ntBASIC1.85□□□□□ -2.11
NR1D1P20393 AC019129.1-201ENST00000403786 261 ntBASIC1.85□□□□□ -2.11
NR1D1P20393 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.85□□□□□ -2.11
NR1D1P20393 RNU6-436P-201ENST00000516171 114 ntBASIC1.85□□□□□ -2.11
NR1D1P20393 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.85□□□□□ -2.11
NR1D1P20393 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
NR1D1P20393 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.85□□□□□ -2.11
NR1D1P20393 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.85□□□□□ -2.11
NR1D1P20393 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NR1D1P20393 MIR378A-201ENST00000362177 66 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 Y_RNA.54-201ENST00000362766 105 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 Y_RNA.275-201ENST00000364726 110 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 RNU6-338P-201ENST00000383888 105 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 RNU6-514P-201ENST00000384208 107 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 AL031003.1-201ENST00000404229 172 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.84□□□□□ -2.11
NR1D1P20393 SNORD65B-201ENST00000459126 73 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 SNORD13-201ENST00000459299 104 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 AC091959.1-201ENST00000495857 238 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NR1D1P20393 RNU4-71P-201ENST00000516258 113 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 SNORA27.4-201ENST00000516650 95 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 AC022254.1-201ENST00000567857 235 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 MIR4643-201ENST00000577473 78 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 AC009779.6-201ENST00000603972 165 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 AL353149.1-201ENST00000610667 244 ntBASIC1.84□□□□□ -2.11
NR1D1P20393 AC131280.1-202ENST00000624067 4211 ntBASIC1.84□□□□□ -2.12
NR1D1P20393 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NR1D1P20393 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.84□□□□□ -2.12
NR1D1P20393 RNU6-457P-201ENST00000363999 107 ntBASIC1.83□□□□□ -2.12
NR1D1P20393 MIR873-201ENST00000401120 77 ntBASIC1.83□□□□□ -2.12
NR1D1P20393 RNU2-14P-201ENST00000411053 191 ntBASIC1.83□□□□□ -2.12
NR1D1P20393 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.83□□□□□ -2.12
NR1D1P20393 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.83□□□□□ -2.12
NR1D1P20393 AL162424.1-201ENST00000602325 221 ntBASIC1.83□□□□□ -2.12
NR1D1P20393 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
NR1D1P20393 Y_RNA.82-201ENST00000363000 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.92-201ENST00000363043 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RNU4-80P-201ENST00000363200 141 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RNU6-324P-201ENST00000363957 106 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RNA5SP493-201ENST00000364115 91 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.235-201ENST00000364412 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RNU6-740P-201ENST00000364734 105 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.306-201ENST00000365015 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.312-201ENST00000365089 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.322-201ENST00000365151 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.329-201ENST00000365209 107 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 SNORA20B-201ENST00000384220 132 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 AC016909.1-201ENST00000415916 166 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 AC060773.1-201ENST00000421698 310 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 HSPE1P13-201ENST00000451143 297 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.650-201ENST00000459002 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RNU6-191P-201ENST00000516295 94 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.777-201ENST00000516982 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 RPL21P9-201ENST00000556149 474 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 MIR4282-201ENST00000583613 67 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.771-201ENST00000598668 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 DEFB117-201ENST00000602356 141 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 Y_RNA.789-201ENST00000622480 102 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.82□□□□□ -2.12
NR1D1P20393 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.82□□□□□ -2.12
NR1D1P20393 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.82□□□□□ -2.12
NR1D1P20393 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NR1D1P20393 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.81□□□□□ -2.12
NR1D1P20393 SNORA27.1-201ENST00000362604 124 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 Y_RNA.65-201ENST00000362846 100 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 Y_RNA.76-201ENST00000362931 109 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 RNU6-200P-201ENST00000364743 107 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 RNA5SP190-201ENST00000365222 118 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 MIR515-2-201ENST00000384883 83 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 MIR515-1-201ENST00000384884 83 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 AL355796.1-201ENST00000406706 323 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 MIR1253-201ENST00000408273 105 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 RNU2-61P-201ENST00000411069 191 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.81□□□□□ -2.12
NR1D1P20393 AC011406.1-201ENST00000512440 370 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.81□□□□□ -2.12
NR1D1P20393 AL137100.2-201ENST00000555786 315 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.81□□□□□ -2.12
NR1D1P20393 MIR3169-201ENST00000578032 83 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 MIR3145-201ENST00000580727 82 ntBASIC1.81□□□□□ -2.12
NR1D1P20393 Y_RNA.217-201ENST00000364214 105 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 SNORA48.1-201ENST00000390879 135 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 RNU2-64P-201ENST00000411315 191 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 AC009310.1-201ENST00000414414 451 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 Z98949.2-201ENST00000440996 144 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 ATP5J2P3-201ENST00000451550 258 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 SNORD2.1-201ENST00000458762 69 ntBASIC1.8□□□□□ -2.12
NR1D1P20393 Y_RNA.641-201ENST00000459414 105 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms