Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 Y_RNA.384-201ENST00000383909 102 ntBASIC0.96□□□□□ -2.26
MSH4O15457 RNU6-708P-201ENST00000384217 107 ntBASIC0.96□□□□□ -2.26
MSH4O15457 RNY3P14-201ENST00000384309 102 ntBASIC0.96□□□□□ -2.26
MSH4O15457 RNU6-1297P-201ENST00000384415 104 ntBASIC0.96□□□□□ -2.26
MSH4O15457 Y_RNA.577-201ENST00000384794 101 ntBASIC0.96□□□□□ -2.26
MSH4O15457 MIR625-201ENST00000385047 85 ntBASIC0.96□□□□□ -2.26
MSH4O15457 RNA5SP482-201ENST00000391269 118 ntBASIC0.96□□□□□ -2.26
MSH4O15457 Y_RNA.592-201ENST00000410274 109 ntBASIC0.96□□□□□ -2.26
MSH4O15457 Y_RNA.605-201ENST00000410577 105 ntBASIC0.96□□□□□ -2.26
MSH4O15457 AC233266.1-201ENST00000454518 96 ntBASIC0.96□□□□□ -2.26
MSH4O15457 Y_RNA.632-201ENST00000459189 102 ntBASIC0.96□□□□□ -2.26
MSH4O15457 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
MSH4O15457 RNU6-947P-201ENST00000516264 106 ntBASIC0.96□□□□□ -2.26
MSH4O15457 RNU6-917P-201ENST00000516294 104 ntBASIC0.96□□□□□ -2.26
MSH4O15457 RNU6-699P-201ENST00000517081 110 ntBASIC0.96□□□□□ -2.26
MSH4O15457 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.96□□□□□ -2.26
MSH4O15457 AC242852.1-201ENST00000612151 96 ntBASIC0.96□□□□□ -2.26
MSH4O15457 AC011476.5-201ENST00000615594 130 ntBASIC0.96□□□□□ -2.26
MSH4O15457 AC244015.1-201ENST00000622301 99 ntBASIC0.96□□□□□ -2.26
MSH4O15457 AC112487.2-201ENST00000637950 304 ntBASIC0.96□□□□□ -2.26
MSH4O15457 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
MSH4O15457 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
MSH4O15457 Y_RNA.70-201ENST00000362886 110 ntBASIC0.95□□□□□ -2.26
MSH4O15457 RNU6-961P-201ENST00000363893 105 ntBASIC0.95□□□□□ -2.26
MSH4O15457 RNU6-136P-201ENST00000384663 107 ntBASIC0.95□□□□□ -2.26
MSH4O15457 MIR559-201ENST00000385188 96 ntBASIC0.95□□□□□ -2.26
MSH4O15457 RNU6-910P-201ENST00000390844 107 ntBASIC0.95□□□□□ -2.26
MSH4O15457 RNY4P36-201ENST00000391116 96 ntBASIC0.95□□□□□ -2.26
MSH4O15457 RNU6-1054P-201ENST00000411293 104 ntBASIC0.95□□□□□ -2.26
MSH4O15457 MTND4P28-201ENST00000426217 387 ntBASIC0.95□□□□□ -2.26
MSH4O15457 AC093019.1-201ENST00000443135 252 ntBASIC0.95□□□□□ -2.26
MSH4O15457 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.95□□□□□ -2.26
MSH4O15457 SUMO1P2-201ENST00000452524 304 ntBASIC0.95□□□□□ -2.26
MSH4O15457 AC048334.1-201ENST00000477975 159 ntBASIC0.95□□□□□ -2.26
MSH4O15457 RNU6-1096P-201ENST00000517089 102 ntBASIC0.95□□□□□ -2.26
MSH4O15457 AC055872.1-201ENST00000570978 278 ntBASIC0.95□□□□□ -2.26
MSH4O15457 AC005828.6-201ENST00000606610 232 ntBASIC0.95□□□□□ -2.26
MSH4O15457 AC022709.1-201ENST00000615967 87 ntBASIC0.95□□□□□ -2.26
MSH4O15457 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.95□□□□□ -2.26
MSH4O15457 RNU6-117P-201ENST00000365415 107 ntBASIC0.94□□□□□ -2.26
MSH4O15457 SNORA2.2-201ENST00000365473 135 ntBASIC0.94□□□□□ -2.26
MSH4O15457 RNU6-1310P-201ENST00000384153 107 ntBASIC0.94□□□□□ -2.26
MSH4O15457 MIR520G-201ENST00000385064 90 ntBASIC0.94□□□□□ -2.26
MSH4O15457 RNU5A-5P-201ENST00000411054 116 ntBASIC0.94□□□□□ -2.26
MSH4O15457 MTND5P20-201ENST00000448677 143 ntBASIC0.94□□□□□ -2.26
MSH4O15457 CHEK2P4-201ENST00000450340 246 ntBASIC0.94□□□□□ -2.26
MSH4O15457 ELOCP24-201ENST00000456370 334 ntBASIC0.94□□□□□ -2.26
MSH4O15457 AL049830.1-201ENST00000468034 425 ntBASIC0.94□□□□□ -2.26
MSH4O15457 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
MSH4O15457 AL117351.2-201ENST00000513571 157 ntBASIC0.94□□□□□ -2.26
MSH4O15457 RNU6-63P-201ENST00000516690 95 ntBASIC0.94□□□□□ -2.26
MSH4O15457 MIR2355-201ENST00000517199 87 ntBASIC0.94□□□□□ -2.26
MSH4O15457 AC023442.1-201ENST00000531247 422 ntBASIC0.94□□□□□ -2.26
MSH4O15457 AC104985.2-201ENST00000620598 500 ntBASIC0.94□□□□□ -2.26
MSH4O15457 RNU4-79P-201ENST00000362764 141 ntBASIC0.93□□□□□ -2.26
MSH4O15457 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.93□□□□□ -2.26
MSH4O15457 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.93□□□□□ -2.26
MSH4O15457 AC104332.1-201ENST00000440471 797 ntBASIC0.93□□□□□ -2.26
MSH4O15457 RNU6-1223P-201ENST00000517124 104 ntBASIC0.93□□□□□ -2.26
MSH4O15457 AL117336.2-201ENST00000602435 335 ntBASIC0.93□□□□□ -2.26
MSH4O15457 AL357312.1-201ENST00000603879 298 ntBASIC0.93□□□□□ -2.26
MSH4O15457 Y_RNA.804-201ENST00000615262 101 ntBASIC0.93□□□□□ -2.26
MSH4O15457 AC004467.1-201ENST00000615678 330 ntBASIC0.93□□□□□ -2.26
MSH4O15457 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
MSH4O15457 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.92□□□□□ -2.26
MSH4O15457 MIRLET7C-201ENST00000362160 84 ntBASIC0.92□□□□□ -2.26
MSH4O15457 Y_RNA.243-201ENST00000364481 109 ntBASIC0.92□□□□□ -2.26
MSH4O15457 RNU6-1009P-201ENST00000390996 107 ntBASIC0.92□□□□□ -2.26
MSH4O15457 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
MSH4O15457 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.92□□□□□ -2.26
MSH4O15457 AC245047.7-201ENST00000440265 293 ntBASIC0.92□□□□□ -2.26
MSH4O15457 RPL39P39-201ENST00000455840 151 ntBASIC0.92□□□□□ -2.26
MSH4O15457 Y_RNA.661-201ENST00000516003 99 ntBASIC0.92□□□□□ -2.26
MSH4O15457 Y_RNA.702-201ENST00000516843 96 ntBASIC0.92□□□□□ -2.26
MSH4O15457 AC144568.1-201ENST00000520139 137 ntBASIC0.92□□□□□ -2.26
MSH4O15457 AL358944.1-201ENST00000528537 144 ntBASIC0.92□□□□□ -2.26
MSH4O15457 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.92□□□□□ -2.26
MSH4O15457 AC138305.3-201ENST00000624988 240 ntBASIC0.92□□□□□ -2.26
MSH4O15457 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
MSH4O15457 SNORD114-7-201ENST00000362520 77 ntBASIC0.91□□□□□ -2.26
MSH4O15457 RNU6-490P-201ENST00000362985 107 ntBASIC0.91□□□□□ -2.26
MSH4O15457 Y_RNA.80-201ENST00000362996 102 ntBASIC0.91□□□□□ -2.26
MSH4O15457 RNU4-41P-201ENST00000364426 143 ntBASIC0.91□□□□□ -2.26
MSH4O15457 Y_RNA.354-201ENST00000365448 111 ntBASIC0.91□□□□□ -2.26
MSH4O15457 RNU6-1040P-201ENST00000383974 107 ntBASIC0.91□□□□□ -2.26
MSH4O15457 Y_RNA.463-201ENST00000384271 102 ntBASIC0.91□□□□□ -2.26
MSH4O15457 Y_RNA.485-201ENST00000384395 102 ntBASIC0.91□□□□□ -2.26
MSH4O15457 MIR19B1-201ENST00000384829 87 ntBASIC0.91□□□□□ -2.26
MSH4O15457 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.91□□□□□ -2.26
MSH4O15457 MTCO2P27-201ENST00000420740 428 ntBASIC0.91□□□□□ -2.26
MSH4O15457 Z98949.2-201ENST00000440996 144 ntBASIC0.91□□□□□ -2.26
MSH4O15457 RPEP5-201ENST00000441137 268 ntBASIC0.91□□□□□ -2.26
MSH4O15457 SNORD19B-201ENST00000459623 84 ntBASIC0.91□□□□□ -2.26
MSH4O15457 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
MSH4O15457 RNU7-4P-201ENST00000516961 62 ntBASIC0.91□□□□□ -2.26
MSH4O15457 RNU6-1116P-201ENST00000517269 99 ntBASIC0.91□□□□□ -2.26
MSH4O15457 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.91□□□□□ -2.26
MSH4O15457 MIR4795-201ENST00000584182 89 ntBASIC0.91□□□□□ -2.26
MSH4O15457 AC133104.2-201ENST00000615272 193 ntBASIC0.91□□□□□ -2.26
MSH4O15457 U2.1-201ENST00000618978 145 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms