Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RNU1-78P-201ENST00000391248 165 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 AL031003.1-201ENST00000404229 172 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RN7SKP200-201ENST00000410564 320 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RPS27P16-201ENST00000425758 201 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 FTH1P12-201ENST00000432137 551 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RPS4XP11-201ENST00000446897 772 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RPL21P9-201ENST00000556149 474 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 AC091178.2-201ENST00000584401 117 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 uc_338.22-201ENST00000622722 187 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 AC006435.5-201ENST00000624486 112 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 AL606534.2-204ENST00000635008 178 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 MTND4P29-201ENST00000503122 1372 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 MIR613-201ENST00000385248 95 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 RNU2-54P-201ENST00000410299 190 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 CALM2P4-201ENST00000430810 426 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 AC093850.1-201ENST00000454121 251 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 AC010655.3-201ENST00000478818 450 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 AC079140.2-201ENST00000506193 142 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 RNU6-436P-201ENST00000516171 114 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 RNU6-911P-201ENST00000516523 104 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 RNA5SP480-201ENST00000516840 109 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 MIR3937-201ENST00000580135 106 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 MIR4422-201ENST00000581938 83 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.02□□□□□ -2.25
NKX2-6A6NCS4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 RNU6-937P-201ENST00000384325 106 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 AC027119.1-201ENST00000440877 241 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 PGBD4P5-201ENST00000445958 426 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 RNU6-976P-201ENST00000516086 111 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 AC006380.1-201ENST00000603598 186 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 AC040896.1-201ENST00000613819 479 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 MIR6788-201ENST00000618842 66 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 SNORD3E-202ENST00000627253 216 ntBASIC1.01□□□□□ -2.25
NKX2-6A6NCS4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NKX2-6A6NCS4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.143-201ENST00000363520 106 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNU6-450P-201ENST00000364654 107 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNU6-474P-201ENST00000384243 107 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.540-201ENST00000384638 111 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 U8.16-201ENST00000391279 133 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 AL034345.1-201ENST00000407768 123 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNU4-30P-201ENST00000410245 143 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNU6-130P-201ENST00000411112 103 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 AL354751.2-201ENST00000415471 210 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 DYNLT3P2-201ENST00000442517 295 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1278P-201ENST00000516130 107 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNA5SP168-201ENST00000516642 112 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNU2-56P-201ENST00000516826 190 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1223P-201ENST00000517124 104 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 RPS29P30-201ENST00000600975 111 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 PART1_1.1-201ENST00000611761 217 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 AL078604.3-201ENST00000615580 211 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 AL008636.1-201ENST00000625038 1018 ntBASIC1□□□□□ -2.25
NKX2-6A6NCS4 SNORD81.1-201ENST00000363064 77 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.138-201ENST00000363462 102 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 RNU4-41P-201ENST00000364426 143 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 RNU1-115P-201ENST00000365329 160 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 SNORD42.2-201ENST00000365570 69 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 RNU6-950P-201ENST00000384651 107 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 RNU5A-5P-201ENST00000411054 116 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.621-201ENST00000411065 96 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 MCFD2P1-201ENST00000417812 300 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 PMCHL1-202ENST00000423102 261 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 Z98949.2-201ENST00000440996 144 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 RNU7-94P-201ENST00000459576 63 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 AL049830.1-201ENST00000468034 425 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 AC092991.1-201ENST00000477176 376 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 OR9P1P-201ENST00000496431 281 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1170P-201ENST00000515974 106 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 RNU6-341P-201ENST00000516973 96 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 AC019288.1-201ENST00000557918 224 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 MIR3684-201ENST00000579779 74 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 MIR3145-201ENST00000580727 82 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 AC022441.3-201ENST00000605737 136 ntBASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.216-201ENST00000364205 93 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms