Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.79□□□□□ -2.12
SAA2-SAA4A0A096LPE2 MIR4672-201ENST00000583126 81 ntBASIC1.79□□□□□ -2.12
SAA2-SAA4A0A096LPE2 AC072026.1-201ENST00000605023 201 ntBASIC1.79□□□□□ -2.12
SAA2-SAA4A0A096LPE2 RNU2-4P-201ENST00000606190 192 ntBASIC1.79□□□□□ -2.12
SAA2-SAA4A0A096LPE2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.79□□□□□ -2.12
SAA2-SAA4A0A096LPE2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SAA2-SAA4A0A096LPE2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 Y_RNA.180-201ENST00000363867 113 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 RNU6-969P-201ENST00000383900 105 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 RNU6-144P-201ENST00000383951 107 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 SNORA6-201ENST00000384033 151 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 SNORA8.3-201ENST00000384679 139 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 RNU6-376P-201ENST00000384731 106 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 Y_RNA.571-201ENST00000384753 98 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 MIR526A2-201ENST00000390198 65 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 SNORD23.1-201ENST00000408212 104 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 HMGN2P3-201ENST00000433603 273 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 HMGN2P5-201ENST00000436882 273 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 TRBV12-1-201ENST00000479785 344 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 AL163195.1-201ENST00000496941 348 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 RNA5SP200-201ENST00000516360 103 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 SNORD53-201ENST00000579969 78 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 MIR4448-201ENST00000584360 86 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 AC002984.1-201ENST00000591692 448 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 AL359075.3-201ENST00000613288 217 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 Y_RNA.802-201ENST00000614892 130 ntBASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SAA2-SAA4A0A096LPE2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.238-201ENST00000364441 102 ntBASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.412-201ENST00000384001 104 ntBASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 CST2P1-201ENST00000425770 87 ntBASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-437P-201ENST00000459408 95 ntBASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RPL23AP54-201ENST00000495129 419 ntBASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU7-116P-201ENST00000516940 62 ntBASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.7-201ENST00000362352 102 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-674P-201ENST00000363831 107 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU4-13P-201ENST00000364019 141 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.229-201ENST00000364347 113 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.240-201ENST00000364469 95 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP138-201ENST00000365098 114 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA72-201ENST00000384339 132 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA8-201ENST00000384574 139 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MT-TT-201ENST00000387460 66 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA48.3-201ENST00000391081 134 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU11-3P-201ENST00000391111 133 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU4-53P-201ENST00000410828 140 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU2-40P-201ENST00000410833 196 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU5E-9P-201ENST00000411164 104 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC010154.1-201ENST00000425857 269 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RPS27P1-201ENST00000450552 247 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-717P-201ENST00000459076 104 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNVU1-2-201ENST00000516326 135 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU1-142P-201ENST00000516682 145 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SNORA31.25-201ENST00000517242 134 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC011604.1-201ENST00000545978 196 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC005786.1-201ENST00000588553 154 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC022217.4-201ENST00000604389 163 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AL021707.8-201ENST00000609428 183 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR6079-201ENST00000635807 62 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 U6.106-201ENST00000636360 105 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC100821.1-201ENST00000523153 2479 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC245060.5-201ENST00000610778 3293 ntBASIC1.76□□□□□ -2.13
SAA2-SAA4A0A096LPE2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC018630.2-201ENST00000534866 2403 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.270-201ENST00000364693 104 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC245047.4-201ENST00000433189 144 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC008413.1-201ENST00000511864 177 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SCARNA16.3-201ENST00000516595 184 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU7-193P-201ENST00000516723 65 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC024995.1-201ENST00000523014 93 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MRPS18CP4-201ENST00000535821 231 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR4724-201ENST00000579485 89 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR5688-201ENST00000580619 83 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SCARNA15.3-201ENST00000626315 122 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 SCARNA4.1-201ENST00000628597 123 ntBASIC1.75□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.203-201ENST00000364106 102 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR616-201ENST00000385293 97 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNA5SP338-201ENST00000410495 85 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC245047.8-201ENST00000456455 284 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-561P-201ENST00000516222 102 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 RNU6-341P-201ENST00000516973 96 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC084364.2-201ENST00000546924 395 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 AC108706.1-201ENST00000611053 297 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 MIR6873-201ENST00000622788 63 ntBASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SAA2-SAA4A0A096LPE2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.75-201ENST00000362927 97 ntBASIC1.73□□□□□ -2.13
SAA2-SAA4A0A096LPE2 Y_RNA.182-201ENST00000363880 111 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms