Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 SNORD115-2-201ENST00000362842 82 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 SNORA38.1-201ENST00000364172 131 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 SNORD115-20-201ENST00000365099 82 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 RNU1-61P-201ENST00000516107 151 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 SNORD45.4-201ENST00000516629 73 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 RNA5SP33-201ENST00000516687 98 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 AL356274.2-201ENST00000624379 3752 ntBASIC4.84□□□□□ -1.63
CCDC61Q9Y6R9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.84□□□□□ -1.64
CCDC61Q9Y6R9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 Y_RNA.171-201ENST00000363760 102 ntBASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 Y_RNA.241-201ENST00000364470 117 ntBASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 U8.5-201ENST00000364528 136 ntBASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 AC060773.1-201ENST00000421698 310 ntBASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 RNU6-965P-201ENST00000516721 96 ntBASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 MIR548AE2-201ENST00000583456 67 ntBASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC61Q9Y6R9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 RNU6-1163P-201ENST00000364516 107 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 RPL31P63-201ENST00000422565 375 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 AC069257.2-201ENST00000441819 155 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 RNU7-94P-201ENST00000459576 63 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 RNU6-523P-201ENST00000516304 54 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 AC002076.2-201ENST00000617362 122 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 MIR1248-201ENST00000629190 106 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 ICE2P2-201ENST00000483823 2787 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 AC092881.1-201ENST00000638218 2733 ntBASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC61Q9Y6R9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 Y_RNA.140-201ENST00000363474 103 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 SNORA80E-201ENST00000384744 137 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 MIR93-201ENST00000385024 80 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 RNU6-129P-201ENST00000391022 107 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 AL109933.2-201ENST00000452651 260 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 RN7SL594P-201ENST00000470590 287 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 RNU1-142P-201ENST00000516682 145 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 MAPK10-253ENST00000641010 4072 ntBASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC61Q9Y6R9 SNORD38.1-201ENST00000363863 68 ntBASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 MIR128-1-201ENST00000384921 82 ntBASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 MIR634-201ENST00000385208 97 ntBASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 PHBP14-201ENST00000512887 367 ntBASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC61Q9Y6R9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 MFSD8-233ENST00000641482 4860 ntBASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 SNORD74.4-201ENST00000364129 80 ntBASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 RNA5SP467-201ENST00000391274 118 ntBASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 AC123900.1-201ENST00000420390 96 ntBASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 AL445685.2-201ENST00000422551 342 ntBASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 RNU6-871P-201ENST00000516122 100 ntBASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 RNU2-58P-201ENST00000516403 183 ntBASIC4.79□□□□□ -1.64
CCDC61Q9Y6R9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 RNA5SP42-201ENST00000364278 115 ntBASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 Y_RNA.247-201ENST00000364500 92 ntBASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 SNORA31.4-201ENST00000516049 129 ntBASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 MIR3152-201ENST00000579801 74 ntBASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC61Q9Y6R9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 AL135938.1-201ENST00000443141 297 ntBASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 RPPH1-2P-201ENST00000516688 293 ntBASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 AC096644.4-201ENST00000563417 2912 ntBASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CCDC61Q9Y6R9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 Y_RNA.470-201ENST00000384307 117 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms