Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 U1.23-201ENST00000610293 146 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 RNU1-68P-201ENST00000615382 146 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 U1.39-201ENST00000621562 146 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 Y_RNA.107-201ENST00000363190 121 ntBASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 SNORD46.1-201ENST00000364139 104 ntBASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 RNU1-33P-201ENST00000364249 162 ntBASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 RNA5SP252-201ENST00000391131 119 ntBASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 SNORA31.21-201ENST00000517180 77 ntBASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 MIR3944-201ENST00000581277 108 ntBASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 MIR4765-201ENST00000585007 77 ntBASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NUCKS1Q9H1E3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 RNU6-228P-201ENST00000362700 106 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 RNVU1-14-201ENST00000384770 164 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 Y_RNA.593-201ENST00000410292 98 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 RNA5SP229-201ENST00000410809 99 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 RNA5SP344-201ENST00000411081 104 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 AC025750.2-201ENST00000442609 450 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 AC245166.1-201ENST00000521012 253 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 AC073413.2-201ENST00000604332 360 ntBASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NUCKS1Q9H1E3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 RNU6-349P-201ENST00000362402 107 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 SNORA63D-201ENST00000364359 132 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 Y_RNA.265-201ENST00000364677 108 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 Y_RNA.298-201ENST00000364960 107 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 SNORA70.4-201ENST00000365509 134 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 MIR548D2-201ENST00000384955 97 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 RNA5SP225-201ENST00000410874 135 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 RNU6-893P-201ENST00000458841 100 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 MRPS36P2-201ENST00000512569 299 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 SUMO2P16-201ENST00000519475 264 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 AC021443.1-201ENST00000604478 211 ntBASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.53□□□□□ -1.84
NUCKS1Q9H1E3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 RNU1-70P-201ENST00000362618 164 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 RNA5SP72-201ENST00000364442 117 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 Y_RNA.466-201ENST00000384294 113 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 MIR34B-201ENST00000385076 84 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 HMGN2P18-201ENST00000450680 270 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 RNA5SP112-201ENST00000515937 99 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-711P-201ENST00000517255 106 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 AC004486.1-201ENST00000546846 233 ntBASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.52□□□□□ -1.85
NUCKS1Q9H1E3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 RNU1-72P-201ENST00000362976 153 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 SNORA2.2-201ENST00000365473 135 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-1124P-201ENST00000384169 107 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AC244505.4-201ENST00000434905 287 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 SSXP5-201ENST00000443473 287 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AC233266.1-201ENST00000454518 96 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 snoU13.22-201ENST00000459428 104 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AC091153.1-201ENST00000466297 402 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-965P-201ENST00000516721 96 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-56P-201ENST00000516986 93 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AC242852.1-201ENST00000612151 96 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AC244015.1-201ENST00000622301 99 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 MIR1248-201ENST00000629190 106 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AL162726.3-218ENST00000636401 95 ntBASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUCKS1Q9H1E3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 Y_RNA.17-201ENST00000362433 111 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 RNA5SP387-201ENST00000364226 106 ntBASIC3.5□□□□□ -1.85
NUCKS1Q9H1E3 RNU6-1104P-201ENST00000384723 104 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms