Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MIR1248-201ENST00000629190 106 ntBASIC1.99□□□□□ -2.09
PKP4Q99569 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
PKP4Q99569 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 SNORD114-7-201ENST00000362520 77 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 RNU6-1164P-201ENST00000364428 107 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 Y_RNA.262-201ENST00000364641 102 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 BTF3P11-201ENST00000426582 477 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 RPL23AP6-201ENST00000446637 472 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 Y_RNA.637-201ENST00000459424 114 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 RNU1-41P-201ENST00000516161 162 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 RNU6-948P-201ENST00000516374 107 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 RNU1-48P-201ENST00000516400 162 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 RNA5SP490-201ENST00000517141 136 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.98□□□□□ -2.09
PKP4Q99569 AL008718.3-201ENST00000610217 321 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 MIR6715A-201ENST00000615929 79 ntBASIC1.98□□□□□ -2.09
PKP4Q99569 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PKP4Q99569 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PKP4Q99569 SNORD115-3-201ENST00000363100 82 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 Y_RNA.180-201ENST00000363867 113 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 RNU6-801P-201ENST00000364087 105 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 Y_RNA.368-201ENST00000365547 113 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 RNU6-1062P-201ENST00000383908 107 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 RNU6-1235P-201ENST00000384559 107 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 RNU6-57P-201ENST00000411348 103 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PKP4Q99569 BX510359.4-201ENST00000423750 193 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 AL445646.1-201ENST00000431784 216 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 HMGN2P3-201ENST00000433603 273 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 HMGN2P5-201ENST00000436882 273 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 RNU6-498P-201ENST00000459468 107 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 AC093259.1-201ENST00000509755 300 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 AC107393.1-201ENST00000512403 346 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 RNU2-34P-201ENST00000516534 121 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 AC072026.1-201ENST00000605023 201 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 AL365265.1-201ENST00000621045 234 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PKP4Q99569 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.97□□□□□ -2.09
PKP4Q99569 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
PKP4Q99569 Y_RNA.150-201ENST00000363562 102 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU6-418P-201ENST00000384035 107 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 Y_RNA.456-201ENST00000384232 111 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU6-886P-201ENST00000384319 105 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU6-763P-201ENST00000390865 106 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 MIR873-201ENST00000401120 77 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 AL603908.1-201ENST00000406098 201 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU6-855P-201ENST00000410395 104 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU2-2P-201ENST00000410396 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 AL135790.2-201ENST00000437701 267 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 AC016717.1-201ENST00000448918 286 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RPS29P21-201ENST00000496272 170 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.96□□□□□ -2.1
PKP4Q99569 AC010598.1-201ENST00000510378 103 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PKP4Q99569 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.96□□□□□ -2.1
PKP4Q99569 MIR5692C2-201ENST00000577959 77 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.96□□□□□ -2.1
PKP4Q99569 U2.15-201ENST00000611544 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.16-201ENST00000613119 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.12-201ENST00000613778 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.20-201ENST00000613956 192 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.9-201ENST00000615427 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.11-201ENST00000616345 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.2-201ENST00000616535 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.3-201ENST00000617785 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.19-201ENST00000618602 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 RNU2-1-201ENST00000618664 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.6-201ENST00000619225 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.5-201ENST00000619465 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 U2.10-201ENST00000620268 191 ntBASIC1.96□□□□□ -2.1
PKP4Q99569 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 RNU6-653P-201ENST00000363074 106 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 RNU6-271P-201ENST00000363858 105 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 RNU6-743P-201ENST00000364151 106 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 Y_RNA.287-201ENST00000364853 94 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 Y_RNA.308-201ENST00000365043 101 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 Y_RNA.310-201ENST00000365063 113 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 Y_RNA.341-201ENST00000365341 102 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 RNU6-47P-201ENST00000383866 107 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 SNORA20B-201ENST00000384220 132 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PKP4Q99569 RNU11-3P-201ENST00000391111 133 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 RNU6-918P-201ENST00000391219 106 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 AL355796.1-201ENST00000406706 323 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 AC008134.1-201ENST00000420943 193 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 AC104332.1-201ENST00000440471 797 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 U8.19-201ENST00000459095 133 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 snoU13.26-201ENST00000459452 105 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.95□□□□□ -2.1
PKP4Q99569 AC025647.1-201ENST00000517879 253 ntBASIC1.95□□□□□ -2.1
PKP4Q99569 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
PKP4Q99569 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms