Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SNORA8.3-201ENST00000384679 139 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 AL356320.1-201ENST00000429616 163 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.67□□□□□ -1.98
KRT40Q6A162 AC117454.1-201ENST00000491120 168 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 AC018868.1-201ENST00000491307 315 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 RNU7-115P-201ENST00000516433 55 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 RPPH1-2P-201ENST00000516688 293 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 RNU6-63P-201ENST00000516690 95 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 MIR1273D-201ENST00000577266 86 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 AL356280.1-201ENST00000603614 379 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.67□□□□□ -1.98
KRT40Q6A162 RNU4-84P-201ENST00000364200 139 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 Y_RNA.226-201ENST00000364337 114 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 RNU6-312P-201ENST00000364629 107 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 RNU6-117P-201ENST00000365415 107 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 RNU6-969P-201ENST00000383900 105 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 MIR526A2-201ENST00000390198 65 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 SNORA40.19-201ENST00000390846 128 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 Y_RNA.580-201ENST00000391004 95 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 AC074290.1-201ENST00000448883 135 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 RNA5SP20-201ENST00000515976 84 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 RN7SKP164-201ENST00000516138 266 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 RNU6-948P-201ENST00000516374 107 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
KRT40Q6A162 MIR5007-201ENST00000583098 95 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.66□□□□□ -1.98
KRT40Q6A162 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 Y_RNA.802-201ENST00000614892 130 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 MIR548AY-201ENST00000617669 107 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 AC012640.5-201ENST00000623897 319 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 AC068647.2-201ENST00000637380 353 ntBASIC2.66□□□□□ -1.98
KRT40Q6A162 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
KRT40Q6A162 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
KRT40Q6A162 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
KRT40Q6A162 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 Y_RNA.140-201ENST00000363474 103 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 RNU6-1205P-201ENST00000363625 106 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 Y_RNA.332-201ENST00000365271 113 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 RNU6-407P-201ENST00000365280 104 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 RNU6-438P-201ENST00000365561 103 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 SNORD116-18-201ENST00000383961 92 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 RNU6-578P-201ENST00000390980 103 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.65□□□□□ -1.99
KRT40Q6A162 CR769767.1-201ENST00000436337 346 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.65□□□□□ -1.99
KRT40Q6A162 AC093259.1-201ENST00000509755 300 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.65□□□□□ -1.99
KRT40Q6A162 AC090616.3-201ENST00000582184 217 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 MIR6766-201ENST00000622641 72 ntBASIC2.65□□□□□ -1.99
KRT40Q6A162 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
KRT40Q6A162 AC009487.4-201ENST00000624969 3585 ntBASIC2.64□□□□□ -1.99
KRT40Q6A162 RNU1-138P-201ENST00000384093 164 ntBASIC2.64□□□□□ -1.99
KRT40Q6A162 MT-TT-201ENST00000387460 66 ntBASIC2.64□□□□□ -1.99
KRT40Q6A162 RNU6-383P-201ENST00000410864 94 ntBASIC2.64□□□□□ -1.99
KRT40Q6A162 HSPE1P21-201ENST00000438283 308 ntBASIC2.64□□□□□ -1.99
KRT40Q6A162 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.64□□□□□ -1.99
KRT40Q6A162 MIR4744-201ENST00000581563 82 ntBASIC2.64□□□□□ -1.99
KRT40Q6A162 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
KRT40Q6A162 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRT40Q6A162 RNU6-271P-201ENST00000363858 105 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 Y_RNA.229-201ENST00000364347 113 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 RNU1-91P-201ENST00000364746 163 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 RNA5SP125-201ENST00000364843 120 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 SNORD113-1-201ENST00000365321 69 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 SNORA36B-201ENST00000410438 131 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 AL137159.1-201ENST00000452808 512 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 AC245047.8-201ENST00000456455 284 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 AC010409.1-201ENST00000487382 476 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 RPL36AP21-201ENST00000490372 323 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.63□□□□□ -1.99
KRT40Q6A162 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.63□□□□□ -1.99
KRT40Q6A162 Y_RNA.797-201ENST00000515977 94 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 AC127455.1-201ENST00000565496 145 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 AP003357.1-201ENST00000604497 148 ntBASIC2.63□□□□□ -1.99
KRT40Q6A162 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 ZNF271P-202ENST00000465539 1970 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
KRT40Q6A162 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
KRT40Q6A162 RNU6-103P-201ENST00000363686 107 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 RNU6-704P-201ENST00000364162 103 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 RNU6-1323P-201ENST00000384025 107 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 MIR616-201ENST00000385293 97 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
KRT40Q6A162 MIR1278-201ENST00000408753 81 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 RNA5SP511-201ENST00000410487 115 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 AC123900.1-201ENST00000420390 96 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 AL357134.1-201ENST00000445848 426 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.62□□□□□ -1.99
KRT40Q6A162 CYP2C59P-201ENST00000457790 269 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 RNU2-34P-201ENST00000516534 121 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 RNU6-856P-201ENST00000516959 98 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 AC109810.1-201ENST00000534066 224 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 AC015720.1-201ENST00000565251 277 ntBASIC2.62□□□□□ -1.99
KRT40Q6A162 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms