Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Y_RNA.799-201ENST00000364992 102 ntBASIC2.86□□□□□ -1.95
YBX1P67809 SNORA44-201ENST00000384584 132 ntBASIC2.86□□□□□ -1.95
YBX1P67809 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
YBX1P67809 RNA5SP89-201ENST00000410300 108 ntBASIC2.86□□□□□ -1.95
YBX1P67809 Y_RNA.617-201ENST00000410920 90 ntBASIC2.86□□□□□ -1.95
YBX1P67809 AC025750.2-201ENST00000442609 450 ntBASIC2.86□□□□□ -1.95
YBX1P67809 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.86□□□□□ -1.95
YBX1P67809 SNORD11-201ENST00000459124 84 ntBASIC2.86□□□□□ -1.95
YBX1P67809 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
YBX1P67809 AC097462.1-201ENST00000514125 324 ntBASIC2.86□□□□□ -1.95
YBX1P67809 RNU6-168P-201ENST00000516189 101 ntBASIC2.86□□□□□ -1.95
YBX1P67809 RNU6-781P-201ENST00000516377 101 ntBASIC2.86□□□□□ -1.95
YBX1P67809 RNU7-149P-201ENST00000516739 59 ntBASIC2.86□□□□□ -1.95
YBX1P67809 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.86□□□□□ -1.95
YBX1P67809 MIR3616-201ENST00000584070 92 ntBASIC2.86□□□□□ -1.95
YBX1P67809 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.86□□□□□ -1.95
YBX1P67809 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
YBX1P67809 AC008555.8-201ENST00000623602 2168 ntBASIC2.85□□□□□ -1.95
YBX1P67809 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
YBX1P67809 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
YBX1P67809 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
YBX1P67809 SNORD21-201ENST00000383953 95 ntBASIC2.85□□□□□ -1.95
YBX1P67809 Y_RNA.621-201ENST00000411065 96 ntBASIC2.85□□□□□ -1.95
YBX1P67809 AC063976.3-201ENST00000426849 329 ntBASIC2.85□□□□□ -1.95
YBX1P67809 OR9P1P-201ENST00000496431 281 ntBASIC2.85□□□□□ -1.95
YBX1P67809 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.85□□□□□ -1.95
YBX1P67809 RNU2-34P-201ENST00000516534 121 ntBASIC2.85□□□□□ -1.95
YBX1P67809 RNA5SP490-201ENST00000517141 136 ntBASIC2.85□□□□□ -1.95
YBX1P67809 RNU1-104P-201ENST00000517280 175 ntBASIC2.85□□□□□ -1.95
YBX1P67809 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.85□□□□□ -1.95
YBX1P67809 AC097639.2-201ENST00000603159 172 ntBASIC2.85□□□□□ -1.95
YBX1P67809 AC004832.5-201ENST00000608677 401 ntBASIC2.85□□□□□ -1.95
YBX1P67809 JPX_2.1-201ENST00000614161 69 ntBASIC2.85□□□□□ -1.95
YBX1P67809 AL449363.1-201ENST00000617815 186 ntBASIC2.85□□□□□ -1.95
YBX1P67809 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.85□□□□□ -1.95
YBX1P67809 AC002064.3-201ENST00000623448 346 ntBASIC2.85□□□□□ -1.95
YBX1P67809 MIR1248-201ENST00000629190 106 ntBASIC2.85□□□□□ -1.95
YBX1P67809 MIR7157-201ENST00000635801 60 ntBASIC2.85□□□□□ -1.95
YBX1P67809 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
YBX1P67809 MIR4679-1-201ENST00000637619 75 ntBASIC2.85□□□□□ -1.95
YBX1P67809 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
YBX1P67809 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
YBX1P67809 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
YBX1P67809 Y_RNA.52-201ENST00000362760 96 ntBASIC2.84□□□□□ -1.95
YBX1P67809 RNU1-72P-201ENST00000362976 153 ntBASIC2.84□□□□□ -1.95
YBX1P67809 RNU6-743P-201ENST00000364151 106 ntBASIC2.84□□□□□ -1.95
YBX1P67809 RNU6-1164P-201ENST00000364428 107 ntBASIC2.84□□□□□ -1.95
YBX1P67809 Y_RNA.309-201ENST00000365046 111 ntBASIC2.84□□□□□ -1.95
YBX1P67809 Y_RNA.486-201ENST00000384398 107 ntBASIC2.84□□□□□ -1.95
YBX1P67809 MIR218-1-201ENST00000384999 110 ntBASIC2.84□□□□□ -1.95
YBX1P67809 MIR548A1-201ENST00000385041 97 ntBASIC2.84□□□□□ -1.95
YBX1P67809 Y_RNA.649-201ENST00000459077 103 ntBASIC2.84□□□□□ -1.95
YBX1P67809 RN7SKP19-201ENST00000516016 252 ntBASIC2.84□□□□□ -1.95
YBX1P67809 NDUFA5P6-201ENST00000542110 379 ntBASIC2.84□□□□□ -1.95
YBX1P67809 AC018630.3-201ENST00000542637 96 ntBASIC2.84□□□□□ -1.95
YBX1P67809 MIR4662B-201ENST00000579498 81 ntBASIC2.84□□□□□ -1.95
YBX1P67809 MIR3162-201ENST00000581818 82 ntBASIC2.84□□□□□ -1.95
YBX1P67809 AC091178.2-201ENST00000584401 117 ntBASIC2.84□□□□□ -1.95
YBX1P67809 AL022345.2-201ENST00000606307 135 ntBASIC2.84□□□□□ -1.95
YBX1P67809 AC090115.4-201ENST00000609970 188 ntBASIC2.84□□□□□ -1.95
YBX1P67809 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
YBX1P67809 FAM35CP-201ENST00000554755 2470 ntBASIC2.84□□□□□ -1.96
YBX1P67809 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
YBX1P67809 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
YBX1P67809 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
YBX1P67809 SNORA68.1-201ENST00000364537 132 ntBASIC2.83□□□□□ -1.96
YBX1P67809 Y_RNA.346-201ENST00000365385 112 ntBASIC2.83□□□□□ -1.96
YBX1P67809 MIR562-201ENST00000384894 95 ntBASIC2.83□□□□□ -1.96
YBX1P67809 MIR1253-201ENST00000408273 105 ntBASIC2.83□□□□□ -1.96
YBX1P67809 RNA5SP127-201ENST00000411051 133 ntBASIC2.83□□□□□ -1.96
YBX1P67809 Y_RNA.651-201ENST00000459380 103 ntBASIC2.83□□□□□ -1.96
YBX1P67809 RNU6-126P-201ENST00000516685 103 ntBASIC2.83□□□□□ -1.96
YBX1P67809 RNU6-365P-201ENST00000517113 106 ntBASIC2.83□□□□□ -1.96
YBX1P67809 AC006254.2-201ENST00000603259 279 ntBASIC2.83□□□□□ -1.96
YBX1P67809 AL033523.1-201ENST00000605153 153 ntBASIC2.83□□□□□ -1.96
YBX1P67809 AC025166.1-201ENST00000612411 163 ntBASIC2.83□□□□□ -1.96
YBX1P67809 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.83□□□□□ -1.96
YBX1P67809 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.83□□□□□ -1.96
YBX1P67809 AL136360.1-201ENST00000503377 1900 ntBASIC2.83□□□□□ -1.96
YBX1P67809 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
YBX1P67809 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.82□□□□□ -1.96
YBX1P67809 RNU6-1138P-201ENST00000365359 106 ntBASIC2.82□□□□□ -1.96
YBX1P67809 RNU6-546P-201ENST00000383991 107 ntBASIC2.82□□□□□ -1.96
YBX1P67809 RNU6-880P-201ENST00000384526 107 ntBASIC2.82□□□□□ -1.96
YBX1P67809 RNU2-32P-201ENST00000411193 191 ntBASIC2.82□□□□□ -1.96
YBX1P67809 AL139132.1-201ENST00000431587 344 ntBASIC2.82□□□□□ -1.96
YBX1P67809 MICF-203ENST00000432679 129 ntBASIC2.82□□□□□ -1.96
YBX1P67809 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.82□□□□□ -1.96
YBX1P67809 SNORA4.4-201ENST00000515921 135 ntBASIC2.82□□□□□ -1.96
YBX1P67809 RNU6-1096P-201ENST00000517089 102 ntBASIC2.82□□□□□ -1.96
YBX1P67809 AL137790.1-201ENST00000634283 177 ntBASIC2.82□□□□□ -1.96
YBX1P67809 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
YBX1P67809 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.82□□□□□ -1.96
YBX1P67809 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
YBX1P67809 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
YBX1P67809 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
YBX1P67809 MIR624-201ENST00000385217 97 ntBASIC2.81□□□□□ -1.96
YBX1P67809 MIR891A-201ENST00000401237 79 ntBASIC2.81□□□□□ -1.96
YBX1P67809 U6atac.2-201ENST00000408644 118 ntBASIC2.81□□□□□ -1.96
YBX1P67809 RNA5SP274-201ENST00000410484 108 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms