Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC104332.2-201ENST00000429959 156 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 AC023449.1-201ENST00000454464 154 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 AC096725.1-201ENST00000514266 313 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 AC011604.1-201ENST00000545978 196 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC6A11P48066 AC073413.2-201ENST00000604332 360 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 AC011603.4-201ENST00000611325 277 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 U2.20-201ENST00000613956 192 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 MIR6817-201ENST00000615588 66 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC6A11P48066 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A11P48066 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A11P48066 AC245060.5-201ENST00000610778 3293 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A11P48066 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A11P48066 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC6A11P48066 MIR340-201ENST00000362125 95 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 RNA5SP432-201ENST00000362480 116 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 SNORA75.5-201ENST00000391291 81 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
SLC6A11P48066 EEF1B2P7-201ENST00000451177 676 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 RNU7-197P-201ENST00000458836 62 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 AC092991.1-201ENST00000477176 376 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 RNU6-1146P-201ENST00000516282 102 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 RNU6-1299P-201ENST00000516316 100 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 RNU6-1096P-201ENST00000517089 102 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 MIR378D2-201ENST00000580636 98 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 AL021707.8-201ENST00000609428 183 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 U6.73-201ENST00000619194 103 ntBASIC2.75□□□□□ -1.97
SLC6A11P48066 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A11P48066 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC6A11P48066 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A11P48066 Y_RNA.261-201ENST00000364631 102 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 MIR181B1-201ENST00000385240 110 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 RN7SKP123-201ENST00000410732 291 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SLC6A11P48066 AC011406.1-201ENST00000512440 370 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 RNU6-1041P-201ENST00000516254 102 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 RNU6-197P-201ENST00000516680 100 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 RNU2-56P-201ENST00000516826 190 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 RNU6-1234P-201ENST00000516877 103 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 AC090142.3-201ENST00000519012 385 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
SLC6A11P48066 MIR2681-201ENST00000581814 105 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 AC120024.3-201ENST00000603167 156 ntBASIC2.74□□□□□ -1.97
SLC6A11P48066 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A11P48066 AL355596.1-201ENST00000565399 3996 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC6A11P48066 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 snoU2-30.2-201ENST00000362805 70 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 Y_RNA.218-201ENST00000364218 104 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 MIR539-201ENST00000365690 78 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A11P48066 RNU6-1336P-201ENST00000383886 109 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 RNU2-70P-201ENST00000410718 179 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 RNA5SP508-201ENST00000411327 119 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 AL513328.1-201ENST00000446460 224 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 AC245102.2-201ENST00000448956 180 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 AC018868.1-201ENST00000491307 315 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC6A11P48066 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A11P48066 RNU6-1333P-201ENST00000516162 93 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 AC091544.4-201ENST00000555268 342 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 JPX_2.1-201ENST00000614161 69 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 TUG1_4.1-201ENST00000619464 181 ntBASIC2.73□□□□□ -1.97
SLC6A11P48066 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A11P48066 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A11P48066 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SLC6A11P48066 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SLC6A11P48066 Y_RNA.71-201ENST00000362892 104 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 RNU6-1209P-201ENST00000363655 107 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 RNY1P11-201ENST00000363759 113 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 RNU6-1082P-201ENST00000364574 107 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 SNORA25B-201ENST00000365507 128 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 RNU6-484P-201ENST00000384016 107 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 AC003685.2-201ENST00000422795 395 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 RPS15AP28-201ENST00000435088 386 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 RPS29P6-201ENST00000438196 145 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 AC233266.1-201ENST00000454518 96 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.72□□□□□ -1.97
SLC6A11P48066 AP001328.1-201ENST00000528550 176 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 AC242852.1-201ENST00000612151 96 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 uc_338.4-201ENST00000616635 176 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 AC244015.1-201ENST00000622301 99 ntBASIC2.72□□□□□ -1.97
SLC6A11P48066 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SLC6A11P48066 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SLC6A11P48066 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
SLC6A11P48066 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SLC6A11P48066 Y_RNA.796-201ENST00000364268 102 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 Y_RNA.799-201ENST00000364992 102 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 SNORD50B-201ENST00000364995 70 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 MIR520G-201ENST00000385064 90 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 RNU2-55P-201ENST00000411146 174 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 AC008413.1-201ENST00000511864 177 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC6A11P48066 MIR3616-201ENST00000584070 92 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 AC007229.1-201ENST00000590455 412 ntBASIC2.71□□□□□ -1.98
SLC6A11P48066 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms