Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL445685.2-201ENST00000422551 342 ntBASIC2□□□□□ -2.09
HOXC13P31276 snoU13.30-201ENST00000458951 104 ntBASIC2□□□□□ -2.09
HOXC13P31276 RNU7-14P-201ENST00000459331 62 ntBASIC2□□□□□ -2.09
HOXC13P31276 RPS29P11-201ENST00000496507 171 ntBASIC2□□□□□ -2.09
HOXC13P31276 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2□□□□□ -2.09
HOXC13P31276 RNU2-31P-201ENST00000516954 155 ntBASIC2□□□□□ -2.09
HOXC13P31276 MRPS18CP4-201ENST00000535821 231 ntBASIC2□□□□□ -2.09
HOXC13P31276 MIR3144-201ENST00000579460 79 ntBASIC2□□□□□ -2.09
HOXC13P31276 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2□□□□□ -2.09
HOXC13P31276 BX322639.1-202ENST00000423987 2213 ntBASIC2□□□□□ -2.09
HOXC13P31276 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC13P31276 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2□□□□□ -2.09
HOXC13P31276 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
HOXC13P31276 RNU6-661P-201ENST00000362409 107 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 RNA5SP493-201ENST00000364115 91 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 Y_RNA.233-201ENST00000364407 101 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 SNORD63-201ENST00000384262 68 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 MIR32-201ENST00000384965 70 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 SNORA48.1-201ENST00000390879 135 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 RNU6-918P-201ENST00000391219 106 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 RNU2-61P-201ENST00000411069 191 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 AC005002.2-201ENST00000438228 269 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 AC087477.1-201ENST00000465747 340 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HOXC13P31276 RNU7-110P-201ENST00000516891 62 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 RPL21P9-201ENST00000556149 474 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 AP001485.1-201ENST00000604799 199 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 AC011921.3-201ENST00000605540 361 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 U6.106-201ENST00000636360 105 ntBASIC1.99□□□□□ -2.09
HOXC13P31276 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXC13P31276 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXC13P31276 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HOXC13P31276 AC245060.5-201ENST00000610778 3293 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 SNORA25.1-201ENST00000362326 128 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNA5SP361-201ENST00000362686 118 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNU6-1290P-201ENST00000362957 109 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.82-201ENST00000363000 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.92-201ENST00000363043 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.235-201ENST00000364412 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNU4-9P-201ENST00000364951 139 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.306-201ENST00000365015 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.308-201ENST00000365043 101 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.312-201ENST00000365089 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.322-201ENST00000365151 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNU6-326P-201ENST00000365480 107 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNY1P5-201ENST00000383890 115 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 SNORA29-201ENST00000384183 140 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 MIR30A-201ENST00000385092 71 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HOXC13P31276 RNU4-62P-201ENST00000410125 130 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 SNORD12B-201ENST00000410433 91 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNU6-394P-201ENST00000410735 107 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.650-201ENST00000459002 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RPL23AP75-201ENST00000491601 451 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 RNU6-1098P-201ENST00000516772 96 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.777-201ENST00000516982 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 AC027288.2-201ENST00000553028 243 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.771-201ENST00000598668 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXC13P31276 AC037487.3-201ENST00000606668 112 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 SNORD113-5-201ENST00000607261 78 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 Y_RNA.789-201ENST00000622480 102 ntBASIC1.98□□□□□ -2.09
HOXC13P31276 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXC13P31276 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HOXC13P31276 RNU6-626P-201ENST00000363354 107 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 SNORD114-6-201ENST00000364393 72 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 SNORD50B-201ENST00000364995 70 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 RNA5SP190-201ENST00000365222 118 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 RNU6-81P-201ENST00000365608 104 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 RNU6-968P-201ENST00000384076 107 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 RNU6-1289P-201ENST00000384431 106 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 RNU6-21P-201ENST00000384710 107 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 RNU6-1135P-201ENST00000411083 103 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 MTCO1P5-201ENST00000433573 344 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 COX6CP14-201ENST00000469580 174 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 AP000870.1-201ENST00000472927 406 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXC13P31276 RNU6-1219P-201ENST00000516143 112 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXC13P31276 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXC13P31276 MIR4303-201ENST00000581299 66 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXC13P31276 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.97□□□□□ -2.09
HOXC13P31276 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXC13P31276 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXC13P31276 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXC13P31276 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HOXC13P31276 Y_RNA.240-201ENST00000364469 95 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 Y_RNA.275-201ENST00000364726 110 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 SNORD31B-201ENST00000364977 69 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 RNU6-1286P-201ENST00000383871 107 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 Y_RNA.446-201ENST00000384178 104 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 RNU6-514P-201ENST00000384208 107 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 RNU6-17P-201ENST00000384245 107 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 RNU6-1117P-201ENST00000384525 104 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 RNU6-18P-201ENST00000384527 107 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms