Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 U3.9-201ENST00000363823 204 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.229-201ENST00000364347 113 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 SNORA40-201ENST00000388090 126 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SNHG28P0DPA3 RNU6-460P-201ENST00000391158 108 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 AL355796.1-201ENST00000406706 323 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 MIR1278-201ENST00000408753 81 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 RNU6-855P-201ENST00000410395 104 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.629-201ENST00000411368 105 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.26□□□□□ -2.05
SNHG28P0DPA3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.26□□□□□ -2.05
SNHG28P0DPA3 RN7SKP164-201ENST00000516138 266 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.26□□□□□ -2.05
SNHG28P0DPA3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.26□□□□□ -2.05
SNHG28P0DPA3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SNHG28P0DPA3 AC104984.5-201ENST00000586878 94 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 Z82209.1-201ENST00000422141 2135 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.25□□□□□ -2.05
SNHG28P0DPA3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.25□□□□□ -2.05
SNHG28P0DPA3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 RNU6-407P-201ENST00000365280 104 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 SNORD116-13-201ENST00000384408 92 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 SNORA8.3-201ENST00000384679 139 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 SNORA80E-201ENST00000384744 137 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 MIR616-201ENST00000385293 97 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 RNU6-750P-201ENST00000390946 107 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 AL355497.1-201ENST00000406262 551 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 AL365496.1-201ENST00000426885 215 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 RNU6-1211P-201ENST00000459179 105 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 MIR449C-201ENST00000516047 92 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 SNORD19.2-201ENST00000516978 73 ntBASIC2.25□□□□□ -2.05
SNHG28P0DPA3 SNORD114-19-201ENST00000363072 75 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 SNORD32B-201ENST00000364460 84 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 RNU6-768P-201ENST00000384683 107 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 AC006461.1-201ENST00000412637 326 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.24□□□□□ -2.05
SNHG28P0DPA3 AC107626.1-201ENST00000471084 183 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.24□□□□□ -2.05
SNHG28P0DPA3 SNORA31.11-201ENST00000516528 139 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.686-201ENST00000516548 134 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 AC025754.2-201ENST00000606491 432 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 RNU6-91P-201ENST00000607774 107 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.24□□□□□ -2.05
SNHG28P0DPA3 RNU6-103P-201ENST00000363686 107 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 SNORD116-14-201ENST00000383894 92 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 SNORD116-17-201ENST00000383929 92 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 SNORD116-15-201ENST00000384445 92 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 SNORD116-19-201ENST00000384729 92 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 MIR764-201ENST00000390811 85 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 AL035461.1-201ENST00000421490 332 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 AC008267.6-201ENST00000441664 139 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 AC011753.1-201ENST00000451001 220 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.23□□□□□ -2.05
SNHG28P0DPA3 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 RNU7-107P-201ENST00000459121 61 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 RNU7-23P-201ENST00000459465 62 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.23□□□□□ -2.05
SNHG28P0DPA3 AC117454.1-201ENST00000491120 168 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 AC079598.5-201ENST00000547460 117 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 MIR6845-201ENST00000613182 61 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 MIR7843-201ENST00000622274 79 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 MIR203B-201ENST00000636080 86 ntBASIC2.23□□□□□ -2.05
SNHG28P0DPA3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNHG28P0DPA3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.22□□□□□ -2.05
SNHG28P0DPA3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RNU6-655P-201ENST00000362858 107 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RNU1-72P-201ENST00000362976 153 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 U3.8-201ENST00000363675 217 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.294-201ENST00000364916 102 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RNU6-429P-201ENST00000384582 108 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 MIR526A2-201ENST00000390198 65 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 SNORA26.9-201ENST00000391322 122 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 AL512604.1-201ENST00000404812 257 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 AL606845.1-201ENST00000404881 255 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 MIR1185-2-201ENST00000408687 86 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RNU6-588P-201ENST00000410281 105 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 RPL30P13-201ENST00000418873 348 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 TOMM22P2-201ENST00000430735 237 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 AL121914.1-201ENST00000450188 156 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 snoU13.23-201ENST00000458863 104 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 HMGN2P9-201ENST00000476875 229 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 AC107027.2-201ENST00000512197 115 ntBASIC2.22□□□□□ -2.05
SNHG28P0DPA3 AC112693.2-201ENST00000556538 232 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms