Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SNORA31.14-201ENST00000516728 116 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.4□□□□□ -2.63
POLR1AO95602 FRG2DP-202ENST00000566967 323 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 AC005609.4-201ENST00000625071 447 ntBASIC-1.4□□□□□ -2.63
POLR1AO95602 SNORD68-201ENST00000363214 84 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 MTATP6P26-201ENST00000445926 662 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 AGGF1P4-201ENST00000568249 801 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 AC138207.3-201ENST00000585289 166 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 AC078880.5-201ENST00000617845 421 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 AC006435.5-201ENST00000624486 112 ntBASIC-1.41□□□□□ -2.64
POLR1AO95602 AC073343.1-201ENST00000328239 651 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 RNU6-137P-201ENST00000363680 108 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 MIR876-201ENST00000401147 81 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 AC097462.1-201ENST00000514125 324 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 AC012414.2-201ENST00000559474 187 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 AC104072.1-201ENST00000568817 668 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 MIR5591-201ENST00000578248 65 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.42□□□□□ -2.64
POLR1AO95602 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 SNORD115-42-201ENST00000364273 82 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 SNORD64-201ENST00000386683 67 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 AC004866.1-201ENST00000411748 78 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.43□□□□□ -2.64
POLR1AO95602 AC105417.1-201ENST00000514691 285 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 RNU6-344P-201ENST00000516635 111 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 RNU6-430P-201ENST00000517078 107 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 ZNF299P-201ENST00000406845 1804 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 SNORA36A-201ENST00000384221 132 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.43□□□□□ -2.64
POLR1AO95602 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.43□□□□□ -2.64
POLR1AO95602 AC005178.1-201ENST00000508392 440 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.43□□□□□ -2.64
POLR1AO95602 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.43□□□□□ -2.64
POLR1AO95602 MIR320B2-201ENST00000408479 138 ntBASIC-1.44□□□□□ -2.64
POLR1AO95602 AC107027.2-201ENST00000512197 115 ntBASIC-1.44□□□□□ -2.64
POLR1AO95602 RNU7-172P-201ENST00000517125 64 ntBASIC-1.44□□□□□ -2.64
POLR1AO95602 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.44□□□□□ -2.64
POLR1AO95602 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.44□□□□□ -2.64
POLR1AO95602 MIR4770-201ENST00000579149 58 ntBASIC-1.44□□□□□ -2.64
POLR1AO95602 AP000942.4-201ENST00000604811 241 ntBASIC-1.44□□□□□ -2.64
POLR1AO95602 U8.6-201ENST00000364939 135 ntBASIC-1.45□□□□□ -2.64
POLR1AO95602 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.45□□□□□ -2.64
POLR1AO95602 MIR516B1-201ENST00000385211 90 ntBASIC-1.45□□□□□ -2.64
POLR1AO95602 RNA5SP261-201ENST00000410536 106 ntBASIC-1.45□□□□□ -2.64
POLR1AO95602 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.45□□□□□ -2.64
POLR1AO95602 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.45□□□□□ -2.64
POLR1AO95602 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.45□□□□□ -2.64
POLR1AO95602 snoU13.16-201ENST00000459350 104 ntBASIC-1.45□□□□□ -2.64
POLR1AO95602 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 RNU6-336P-201ENST00000364891 107 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 MTCO3P40-201ENST00000392516 676 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 RNU6-855P-201ENST00000410395 104 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.46□□□□□ -2.64
POLR1AO95602 RNU7-62P-201ENST00000458856 62 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 AC010493.1-201ENST00000513479 292 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 RNU6-740P-201ENST00000364734 105 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 RNU2-39P-201ENST00000410604 198 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 AL390729.2-201ENST00000416137 156 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.46□□□□□ -2.64
POLR1AO95602 SNORD38.3-201ENST00000516599 73 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.46□□□□□ -2.64
POLR1AO95602 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.46□□□□□ -2.64
POLR1AO95602 AC004223.4-201ENST00000612426 332 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 AC023158.2-201ENST00000614876 543 ntBASIC-1.46□□□□□ -2.64
POLR1AO95602 MTND5P18-201ENST00000445624 1801 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 RNU6-726P-201ENST00000364680 107 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 SNORD38B-201ENST00000384690 67 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 MTCO3P19-201ENST00000415864 321 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 AC114491.1-201ENST00000416095 246 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.47□□□□□ -2.64
POLR1AO95602 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.47□□□□□ -2.64
POLR1AO95602 AC117522.1-201ENST00000509821 380 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 RNA5SP454-201ENST00000517231 127 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.47□□□□□ -2.64
POLR1AO95602 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.47□□□□□ -2.64
POLR1AO95602 MIR4762-201ENST00000585261 75 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 RNU6-86P-201ENST00000606534 107 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 AC022306.3-201ENST00000619930 550 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 AC091948.2-201ENST00000636510 279 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 MIR382-201ENST00000637119 76 ntBASIC-1.47□□□□□ -2.64
POLR1AO95602 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.48□□□□□ -2.65
POLR1AO95602 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.48□□□□□ -2.65
POLR1AO95602 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.48□□□□□ -2.65
POLR1AO95602 MIR570-201ENST00000384917 97 ntBASIC-1.48□□□□□ -2.65
POLR1AO95602 MIR1257-201ENST00000408490 117 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms