Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SNORA48.1-201ENST00000390879 135 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 RNA5SP467-201ENST00000391274 118 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU4-53P-201ENST00000410828 140 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 AL135786.1-201ENST00000415892 214 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 RPS20P10-201ENST00000451209 253 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.650-201ENST00000459002 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.641-201ENST00000459414 105 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.777-201ENST00000516982 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.771-201ENST00000598668 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.789-201ENST00000622480 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 AC008555.8-201ENST00000623602 2168 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 AL356292.1-201ENST00000283110 373 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 RNA5SP432-201ENST00000362480 116 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 U8.2-201ENST00000363156 134 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-899P-201ENST00000363947 107 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.590-201ENST00000410140 107 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 AL162725.1-201ENST00000435405 301 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 HSPE1P21-201ENST00000438283 308 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 RPS26P45-201ENST00000471748 340 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.679-201ENST00000516416 91 ntBASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.41□□□□□ -2.02
PCDHGA3Q9Y5H0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
PCDHGA3Q9Y5H0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.02
PCDHGA3Q9Y5H0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-1272P-201ENST00000362776 107 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-740P-201ENST00000364734 105 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 Y_RNA.552-201ENST00000384665 112 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 SNORD58.1-201ENST00000391313 66 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 AC099677.2-201ENST00000436385 175 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU4-71P-201ENST00000516258 113 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 MIR3671-201ENST00000580455 88 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA3Q9Y5H0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 Y_RNA.277-201ENST00000364754 102 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-144P-201ENST00000383951 107 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 SNORA72.4-201ENST00000384174 132 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-662P-201ENST00000384253 104 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 Y_RNA.477-201ENST00000384352 108 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 RNA5SP425-201ENST00000410336 112 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 RNA5SP450-201ENST00000411206 102 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 Y_RNA.673-201ENST00000516306 88 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 AC073413.2-201ENST00000604332 360 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 AC073349.3-201ENST00000617616 186 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 AC018630.2-201ENST00000534866 2403 ntBASIC2.39□□□□□ -2.03
PCDHGA3Q9Y5H0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 SNORD27-201ENST00000363981 72 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-801P-201ENST00000364087 105 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 Y_RNA.515-201ENST00000384535 112 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-950P-201ENST00000384651 107 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 snoU13.26-201ENST00000459452 105 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 AC055731.1-201ENST00000474387 401 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 HMGB3P3-201ENST00000510526 400 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 AL358944.1-201ENST00000528537 144 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 MIR5094-201ENST00000578766 85 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 MIR4282-201ENST00000583613 67 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 AC004832.4-201ENST00000608952 331 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 AC012640.5-201ENST00000623897 319 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 AC068647.2-201ENST00000637380 353 ntBASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA3Q9Y5H0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 AL355497.1-201ENST00000406262 551 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 RNA5SP511-201ENST00000410487 115 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 Z98742.3-201ENST00000418637 326 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 snoU13.15-201ENST00000459407 104 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 AL163195.1-201ENST00000496941 348 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 RNU6-341P-201ENST00000516973 96 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 AC015720.1-201ENST00000565251 277 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 MIR5688-201ENST00000580619 83 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 AP003357.1-201ENST00000604497 148 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 AC141273.2-201ENST00000618989 130 ntBASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA3Q9Y5H0 snoU18.1-201ENST00000629629 71 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms