Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL355796.1-201ENST00000406706 323 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.05□□□□□ -2.24
NPAS2Q99743 MRPS18CP6-201ENST00000423587 223 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC245047.3-201ENST00000429428 127 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 RNU7-94P-201ENST00000459576 63 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC091951.2-201ENST00000500762 203 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 RNU6-277P-201ENST00000516272 106 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 RNA5SP220-201ENST00000516298 104 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC018448.1-201ENST00000552843 316 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 MIR4438-201ENST00000585271 93 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC113139.1-201ENST00000605049 239 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC104260.1-201ENST00000616660 539 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC087588.2-201ENST00000617667 426 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 U6.73-201ENST00000619194 103 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 AC073544.1-201ENST00000600110 1595 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RNU6-1301P-201ENST00000362724 104 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 SNORD116-29-201ENST00000384516 83 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 AL034345.1-201ENST00000407768 123 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RNU6-1156P-201ENST00000410365 100 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.04□□□□□ -2.24
NPAS2Q99743 AC114482.1-201ENST00000418010 247 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
NPAS2Q99743 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.04□□□□□ -2.24
NPAS2Q99743 UBE2V1P7-201ENST00000446395 340 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RNU7-169P-201ENST00000459456 61 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RPS27P22-201ENST00000478056 241 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 AC010469.2-201ENST00000496412 480 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 SNORA40.9-201ENST00000515895 93 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RNU6-507P-201ENST00000516045 100 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RNU7-99P-201ENST00000516271 62 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RN7SKP49-201ENST00000516675 260 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RNU6-264P-201ENST00000517134 104 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.04□□□□□ -2.24
NPAS2Q99743 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.04□□□□□ -2.24
NPAS2Q99743 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.04□□□□□ -2.24
NPAS2Q99743 MIR5690-201ENST00000583739 73 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 UBE2V2P2-201ENST00000587677 504 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 AL162424.1-201ENST00000602325 221 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 BX284668.6-201ENST00000606899 438 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 AC068647.2-201ENST00000637380 353 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 MIR1302-1-201ENST00000637932 143 ntBASIC1.04□□□□□ -2.24
NPAS2Q99743 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU6-1264P-201ENST00000383891 107 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU6-926P-201ENST00000384075 107 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 SNORA20B-201ENST00000384220 132 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 Y_RNA.466-201ENST00000384294 113 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU6-1297P-201ENST00000384415 104 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 Y_RNA.498-201ENST00000384460 102 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU6-440P-201ENST00000390882 105 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 SNORD12B-201ENST00000410433 91 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 RAB28P5-201ENST00000427490 651 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 MRPS10P1-201ENST00000448483 130 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 PCNPP5-201ENST00000452246 481 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 Y_RNA.653-201ENST00000459091 95 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU6-625P-201ENST00000459412 107 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU6-470P-201ENST00000515954 104 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 CYCSP23-201ENST00000519781 313 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.03□□□□□ -2.24
NPAS2Q99743 AL132765.2-201ENST00000610812 351 ntBASIC1.03□□□□□ -2.24
NPAS2Q99743 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.03□□□□□ -2.24
NPAS2Q99743 RNU6-454P-201ENST00000364292 107 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 Y_RNA.259-201ENST00000364619 101 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 Y_RNA.577-201ENST00000384794 101 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 MIR625-201ENST00000385047 85 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 SNORA69.1-201ENST00000390904 137 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 MTCYBP4-201ENST00000401524 249 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 Y_RNA.592-201ENST00000410274 109 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 AC096644.2-201ENST00000429278 159 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.02□□□□□ -2.25
NPAS2Q99743 AC010598.1-201ENST00000510378 103 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 AL513534.2-201ENST00000603836 250 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.02□□□□□ -2.25
NPAS2Q99743 AC073349.3-201ENST00000617616 186 ntBASIC1.02□□□□□ -2.25
NPAS2Q99743 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
NPAS2Q99743 RNU6-407P-201ENST00000365280 104 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 Y_RNA.387-201ENST00000383918 102 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 RNU6-1080P-201ENST00000383982 107 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 MIR520E-201ENST00000384867 87 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 MIR559-201ENST00000385188 96 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 SNORA12.1-201ENST00000390873 148 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 RNY4P36-201ENST00000391116 96 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 MTND4P28-201ENST00000426217 387 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
NPAS2Q99743 RNU6-408P-201ENST00000515910 100 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 RNU6-875P-201ENST00000516488 106 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 AC093027.1-201ENST00000546698 429 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 AC055872.1-201ENST00000570978 278 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 AL355375.2-201ENST00000574825 175 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 MIR4801-201ENST00000582704 82 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 RBM11P1-201ENST00000604951 799 ntBASIC1.01□□□□□ -2.25
NPAS2Q99743 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms