Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC117454.1-201ENST00000491120 168 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 RNU4-71P-201ENST00000516258 113 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 AC024405.2-202ENST00000532731 184 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 AC127455.1-201ENST00000565496 145 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 AC022217.4-201ENST00000604389 163 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 AL008718.3-201ENST00000610217 321 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 AC073349.3-201ENST00000617616 186 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 AC100821.1-201ENST00000523153 2479 ntBASIC1.97□□□□□ -2.09
NPIPB3Q92617 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPB3Q92617 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPB3Q92617 Y_RNA.65-201ENST00000362846 100 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNU6-1205P-201ENST00000363625 106 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNU6-379P-201ENST00000363813 104 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 Y_RNA.267-201ENST00000364679 109 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 Y_RNA.539-201ENST00000384635 107 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNU6-950P-201ENST00000384651 107 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNA5SP109-201ENST00000391010 116 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNA5SP100-201ENST00000410903 110 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNA5SP59-201ENST00000410922 110 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 AC105272.1-201ENST00000438604 198 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 Y_RNA.638-201ENST00000459374 113 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RPL23AP54-201ENST00000495129 419 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 SNORA31.11-201ENST00000516528 139 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 RNU6-1291P-201ENST00000516591 104 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 AL358944.1-201ENST00000528537 144 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 AP002004.2-201ENST00000531656 154 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 AC011604.1-201ENST00000545978 196 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 MIR4643-201ENST00000577473 78 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 MIR5692C2-201ENST00000577959 77 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.96□□□□□ -2.1
NPIPB3Q92617 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 AC134026.1-201ENST00000623249 2239 ntBASIC1.96□□□□□ -2.1
NPIPB3Q92617 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPB3Q92617 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPB3Q92617 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NPIPB3Q92617 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNU6-859P-201ENST00000362728 107 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNA5SP456-201ENST00000364002 114 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 SNORD46.1-201ENST00000364139 104 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNU6-144P-201ENST00000383951 107 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNU6-296P-201ENST00000384608 107 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNA5SP212-201ENST00000391223 107 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 SNORA36B-201ENST00000410438 131 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNU6-651P-201ENST00000411040 105 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RPS27P1-201ENST00000450552 247 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 AC233266.1-201ENST00000454518 96 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNA5SP481-201ENST00000516814 122 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNU2-56P-201ENST00000516826 190 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNA5SP402-201ENST00000517148 110 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 RNU6-111P-201ENST00000517179 105 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 AC242852.1-201ENST00000612151 96 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 AL442067.1-201ENST00000613261 223 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 AC244015.1-201ENST00000622301 99 ntBASIC1.95□□□□□ -2.1
NPIPB3Q92617 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NPIPB3Q92617 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.94□□□□□ -2.1
NPIPB3Q92617 Y_RNA.269-201ENST00000364685 89 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 RNU6-338P-201ENST00000383888 105 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 Y_RNA.552-201ENST00000384665 112 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 Y_RNA.621-201ENST00000411065 96 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 AL606517.2-201ENST00000442855 241 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 SNORD109B-201ENST00000458961 67 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 SNORD109A-201ENST00000459128 67 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 RPL23AP63-201ENST00000498752 471 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.94□□□□□ -2.1
NPIPB3Q92617 RNA5SP82-201ENST00000516707 92 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 ELOCP29-201ENST00000588193 334 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 AC005357.1-201ENST00000588399 301 ntBASIC1.94□□□□□ -2.1
NPIPB3Q92617 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
NPIPB3Q92617 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.94□□□□□ -2.1
NPIPB3Q92617 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NPIPB3Q92617 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.94□□□□□ -2.1
NPIPB3Q92617 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
NPIPB3Q92617 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.93□□□□□ -2.1
NPIPB3Q92617 Y_RNA.76-201ENST00000362931 109 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 Y_RNA.293-201ENST00000364908 93 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 Y_RNA.515-201ENST00000384535 112 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 RNU6-847P-201ENST00000411115 108 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 AC009310.1-201ENST00000414414 451 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 AL513328.1-201ENST00000446460 224 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 RN7SKP132-201ENST00000516001 208 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 RNA5SP437-201ENST00000517249 129 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
NPIPB3Q92617 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.93□□□□□ -2.1
NPIPB3Q92617 MIR6895-201ENST00000613497 78 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 AC141273.2-201ENST00000618989 130 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 CTSLP2-204ENST00000629029 392 ntBASIC1.93□□□□□ -2.1
NPIPB3Q92617 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NPIPB3Q92617 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
NPIPB3Q92617 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.93□□□□□ -2.1
NPIPB3Q92617 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NPIPB3Q92617 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.93□□□□□ -2.1
NPIPB3Q92617 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
NPIPB3Q92617 SNORA1B-201ENST00000362535 133 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms