Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
ZNF549Q6P9A3 RNU6-899P-201ENST00000363947 107 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 RNU6-704P-201ENST00000364162 103 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 RNU4-84P-201ENST00000364200 139 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 RNU6-818P-201ENST00000364837 108 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 SNORD31B-201ENST00000364977 69 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 SNORD14D-201ENST00000384390 87 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 MIR613-201ENST00000385248 95 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 RNU4-53P-201ENST00000410828 140 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 AC016909.1-201ENST00000415916 166 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 AC016717.1-201ENST00000448918 286 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 RPS20P10-201ENST00000451209 253 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 SNORD65B-201ENST00000459126 73 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 RNU6-586P-201ENST00000517265 104 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 snoZ196.1-201ENST00000625269 89 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 AC132825.6-201ENST00000638861 357 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 AC080128.1-201ENST00000474389 1917 ntBASIC2.15□□□□□ -2.07
ZNF549Q6P9A3 AL159152.1-201ENST00000635019 2587 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 Z82209.1-201ENST00000422141 2135 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 SNORA27.1-201ENST00000362604 124 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RNU6-275P-201ENST00000364910 107 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 SNORD116-13-201ENST00000384408 92 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 MIR218-1-201ENST00000384999 110 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 MIR873-201ENST00000401120 77 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RNU2-48P-201ENST00000410694 191 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 SEPT7P4-201ENST00000437076 306 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 HSPE1P13-201ENST00000451143 297 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RN7SL429P-201ENST00000479090 223 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RN7SL489P-201ENST00000486185 223 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RN7SL327P-201ENST00000488659 223 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 AC008413.1-201ENST00000511864 177 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RNU6-453P-201ENST00000516819 85 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 MIR3684-201ENST00000579779 74 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 AC105245.1-201ENST00000581934 244 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 MIR5194-201ENST00000582634 120 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 AC069294.1-201ENST00000608397 350 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RN7SL853P-201ENST00000617250 223 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 AL449363.1-201ENST00000617815 186 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 AL590808.1-201ENST00000618696 141 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 MIR7157-201ENST00000635801 60 ntBASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.14□□□□□ -2.07
ZNF549Q6P9A3 U8.7-201ENST00000364940 136 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 RNA5SP240-201ENST00000365355 128 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 MIR526A2-201ENST00000390198 65 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 SNORA40.19-201ENST00000390846 128 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 AC005840.1-201ENST00000498412 377 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 SNORA70.12-201ENST00000516084 153 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 RN7SKP164-201ENST00000516138 266 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 RNU6-965P-201ENST00000516721 96 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 MIR3199-1-201ENST00000582434 88 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 MIR4298-201ENST00000584380 73 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 MIR4753-201ENST00000585119 83 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 AC004832.4-201ENST00000608952 331 ntBASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF549Q6P9A3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 MIR340-201ENST00000362125 95 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RNU1-23P-201ENST00000363361 144 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RNU6-81P-201ENST00000365608 104 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 SNORD116-18-201ENST00000383961 92 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 SNORA8.3-201ENST00000384679 139 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RNU6-578P-201ENST00000390980 103 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 MIR548I2-201ENST00000408348 149 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 MIR1278-201ENST00000408753 81 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 AC080013.2-201ENST00000460866 323 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RPS26P55-201ENST00000471178 356 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 AC010598.1-201ENST00000510378 103 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RNU7-115P-201ENST00000516433 55 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 RNU7-121P-201ENST00000516604 62 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 AC025647.1-201ENST00000517879 253 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 SNORD53-201ENST00000579969 78 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZNF549Q6P9A3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms