Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC138393.2-201ENST00000414742 246 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AC245047.3-201ENST00000429428 127 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.74□□□□□ -2.29
TNFRSF9Q07011 UQCRBP2-201ENST00000447827 297 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 RPS27P22-201ENST00000478056 241 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 SUMO2P16-201ENST00000519475 264 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AC018448.1-201ENST00000552843 316 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AC004584.2-201ENST00000570407 410 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AL390123.1-201ENST00000603216 237 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AL022345.2-201ENST00000606307 135 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AL365434.2-201ENST00000607979 234 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AC104260.1-201ENST00000616660 539 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 MIR6788-201ENST00000618842 66 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.74□□□□□ -2.29
TNFRSF9Q07011 AC027335.2-201ENST00000624030 375 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.74□□□□□ -2.29
TNFRSF9Q07011 RNU6-454P-201ENST00000364292 107 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RNA5SP259-201ENST00000365541 109 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RNU6-310P-201ENST00000384655 107 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 MRPL42P3-201ENST00000401492 326 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RNU2-64P-201ENST00000411315 191 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RBMX2P4-201ENST00000441256 376 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 UBE2V1P7-201ENST00000446395 340 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 MRPS10P1-201ENST00000448483 130 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.73□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.635-201ENST00000459041 101 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 MIR2053-201ENST00000459295 91 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RNA5SP436-201ENST00000516020 115 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RN7SKP49-201ENST00000516675 260 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 RNU6-1223P-201ENST00000517124 104 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 CYCSP23-201ENST00000519781 313 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 MIR151B-201ENST00000584249 96 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 AC087588.2-201ENST00000617667 426 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 AC073544.1-201ENST00000600110 1595 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TNFRSF9Q07011 AC018630.2-201ENST00000534866 2403 ntBASIC0.73□□□□□ -2.29
TNFRSF9Q07011 AC068700.1-201ENST00000565862 3754 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 RNU6-1301P-201ENST00000362724 104 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 RNU6-1188P-201ENST00000363795 107 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 RNY3P11-201ENST00000364153 102 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 RNU6-1264P-201ENST00000383891 107 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.474-201ENST00000384341 102 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
TNFRSF9Q07011 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 RNU6-1156P-201ENST00000410365 100 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 RN7SKP200-201ENST00000410564 320 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.72□□□□□ -2.29
TNFRSF9Q07011 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 MTCO3P10-201ENST00000455912 772 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 AC022493.2-201ENST00000506122 481 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 AC097462.1-201ENST00000514125 324 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 AC074133.1-201ENST00000515696 183 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.72□□□□□ -2.29
TNFRSF9Q07011 SNORA40.9-201ENST00000515895 93 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 RNA5SP20-201ENST00000515976 84 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 ACA64.5-201ENST00000516207 127 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 SNORA20.3-201ENST00000516880 132 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 MIR3973-201ENST00000579824 107 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 AC122108.2-201ENST00000611946 526 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 AL355073.2-201ENST00000612106 557 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 AC006435.5-201ENST00000624486 112 ntBASIC0.72□□□□□ -2.29
TNFRSF9Q07011 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TNFRSF9Q07011 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNU6-407P-201ENST00000365280 104 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNU6-1283P-201ENST00000365314 105 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNU6-950P-201ENST00000384651 107 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 SNORA75.6-201ENST00000391318 127 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 MTCYBP4-201ENST00000401524 249 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 SNORD12B-201ENST00000410433 91 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNA5SP475-201ENST00000410568 110 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RAB28P5-201ENST00000427490 651 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.71□□□□□ -2.3
TNFRSF9Q07011 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNU6-625P-201ENST00000459412 107 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNU6-408P-201ENST00000515910 100 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNU6-307P-201ENST00000516743 106 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 RNU7-172P-201ENST00000517125 64 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 MIR5690-201ENST00000583739 73 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 AC040896.1-201ENST00000613819 479 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 MIR6079-201ENST00000635807 62 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 U6.115-201ENST00000636045 103 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 MIR3674-201ENST00000636576 68 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 AC099654.14-201ENST00000638599 341 ntBASIC0.71□□□□□ -2.3
TNFRSF9Q07011 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
TNFRSF9Q07011 MIR410-201ENST00000362222 80 ntBASIC0.7□□□□□ -2.3
TNFRSF9Q07011 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
TNFRSF9Q07011 RNU6-1123P-201ENST00000362347 106 ntBASIC0.7□□□□□ -2.3
TNFRSF9Q07011 SNORA27.1-201ENST00000362604 124 ntBASIC0.7□□□□□ -2.3
TNFRSF9Q07011 Y_RNA.124-201ENST00000363339 93 ntBASIC0.7□□□□□ -2.3
TNFRSF9Q07011 RNU6-961P-201ENST00000363893 105 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms