Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HOXC13P31276 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
HOXC13P31276 RNU6-222P-201ENST00000362438 107 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 Y_RNA.44-201ENST00000362676 108 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 RNU6-740P-201ENST00000364734 105 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 SNORD113-1-201ENST00000365321 69 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 SNORA36A-201ENST00000384221 132 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 RNY3P4-201ENST00000384428 101 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 RNU6-651P-201ENST00000411040 105 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC13P31276 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC13P31276 HSPE1P25-201ENST00000455484 251 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 RPS29P27-201ENST00000463711 170 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 AC008834.1-201ENST00000511612 175 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 AC108729.3-201ENST00000513484 108 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 MTND5P41-201ENST00000517498 206 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC13P31276 AC104581.2-201ENST00000572227 430 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 MZT1P2-201ENST00000604387 248 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 SNORA43.4-201ENST00000629559 138 ntBASIC2.04□□□□□ -2.08
HOXC13P31276 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HOXC13P31276 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
HOXC13P31276 RNU6-1020P-201ENST00000363684 107 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 Y_RNA.286-201ENST00000364813 102 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 Y_RNA.292-201ENST00000364904 97 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 RNU6-290P-201ENST00000365212 101 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 RNY4P28-201ENST00000365281 93 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 RNU6-438P-201ENST00000365561 103 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 RNU6-804P-201ENST00000384286 107 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 MIR613-201ENST00000385248 95 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 MIR208B-201ENST00000401172 77 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 RNU4-30P-201ENST00000410245 143 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 RNA5SP338-201ENST00000410495 85 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 SNORD13-201ENST00000459299 104 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 SEPT14P8-201ENST00000508026 178 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 RNU6-1012P-201ENST00000516606 109 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXC13P31276 MRPS36P4-201ENST00000534436 298 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 AC016256.1-201ENST00000547971 354 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXC13P31276 AC022254.1-201ENST00000567857 235 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 AC005520.5-201ENST00000613926 164 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
HOXC13P31276 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HOXC13P31276 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HOXC13P31276 RNU4-90P-201ENST00000362773 141 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 RNU6-704P-201ENST00000364162 103 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 RNU6-923P-201ENST00000364753 107 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HOXC13P31276 SNORD78.2-201ENST00000391076 69 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 MIR934-201ENST00000401241 83 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HOXC13P31276 AC091021.1-201ENST00000468051 388 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC13P31276 Y_RNA.662-201ENST00000516028 97 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 Y_RNA.679-201ENST00000516416 91 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 RNU5F-4P-201ENST00000516581 114 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC13P31276 AC090617.3-201ENST00000573670 475 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 Z83818.1-201ENST00000603584 150 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 AC012493.3-201ENST00000604494 112 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 AL365265.1-201ENST00000621045 234 ntBASIC2.02□□□□□ -2.09
HOXC13P31276 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC13P31276 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC13P31276 RNU6-1301P-201ENST00000362724 104 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 RNU6-23P-201ENST00000363283 107 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 Y_RNA.383-201ENST00000383855 97 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 RNU6-1081P-201ENST00000384537 107 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 MIR597-201ENST00000384968 97 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 SNORA53-201ENST00000391141 249 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 MIR1287-201ENST00000408492 90 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 BTF3P4-201ENST00000418852 495 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 AL358453.1-201ENST00000422522 250 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 RNU7-200P-201ENST00000516105 62 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 RNY3P16-201ENST00000516338 101 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 MIR2355-201ENST00000517199 87 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 AC010928.2-201ENST00000588017 287 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 AL162424.1-201ENST00000602325 221 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 AC072026.1-201ENST00000605023 201 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 AL590240.4-201ENST00000616908 390 ntBASIC2.01□□□□□ -2.09
HOXC13P31276 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC13P31276 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC13P31276 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
HOXC13P31276 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC13P31276 RNU6-879P-201ENST00000364328 108 ntBASIC2□□□□□ -2.09
HOXC13P31276 Y_RNA.304-201ENST00000365011 112 ntBASIC2□□□□□ -2.09
HOXC13P31276 Y_RNA.332-201ENST00000365271 113 ntBASIC2□□□□□ -2.09
HOXC13P31276 Y_RNA.398-201ENST00000383952 99 ntBASIC2□□□□□ -2.09
HOXC13P31276 Y_RNA.418-201ENST00000384029 102 ntBASIC2□□□□□ -2.09
HOXC13P31276 RNU6-318P-201ENST00000384283 103 ntBASIC2□□□□□ -2.09
HOXC13P31276 Y_RNA.569-201ENST00000384749 103 ntBASIC2□□□□□ -2.09
HOXC13P31276 Y_RNA.590-201ENST00000410140 107 ntBASIC2□□□□□ -2.09
HOXC13P31276 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
HOXC13P31276 AC123900.1-201ENST00000420390 96 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms