Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MIR4724-201ENST00000579485 89 ntBASIC3.14□□□□□ -1.91
SYN1P17600 MIR378D2-201ENST00000580636 98 ntBASIC3.14□□□□□ -1.91
SYN1P17600 MIR3136-201ENST00000583498 78 ntBASIC3.14□□□□□ -1.91
SYN1P17600 AC009831.4-201ENST00000620744 325 ntBASIC3.14□□□□□ -1.91
SYN1P17600 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
SYN1P17600 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.14□□□□□ -1.91
SYN1P17600 MTND5P18-201ENST00000445624 1801 ntBASIC3.14□□□□□ -1.91
SYN1P17600 AC096644.4-201ENST00000563417 2912 ntBASIC3.13□□□□□ -1.91
SYN1P17600 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYN1P17600 MAPK10-266ENST00000641066 6555 ntBASIC3.13□□□□□ -1.91
SYN1P17600 MIR367-201ENST00000362299 68 ntBASIC3.13□□□□□ -1.91
SYN1P17600 RNU6-529P-201ENST00000363383 104 ntBASIC3.13□□□□□ -1.91
SYN1P17600 RNA5SP99-201ENST00000364020 114 ntBASIC3.13□□□□□ -1.91
SYN1P17600 Y_RNA.549-201ENST00000384657 102 ntBASIC3.13□□□□□ -1.91
SYN1P17600 SNORA26.7-201ENST00000391288 122 ntBASIC3.13□□□□□ -1.91
SYN1P17600 MIR1289-2-201ENST00000408360 111 ntBASIC3.13□□□□□ -1.91
SYN1P17600 AC004866.1-201ENST00000411748 78 ntBASIC3.13□□□□□ -1.91
SYN1P17600 AC245047.4-201ENST00000433189 144 ntBASIC3.13□□□□□ -1.91
SYN1P17600 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
SYN1P17600 RN7SL20P-201ENST00000488827 297 ntBASIC3.13□□□□□ -1.91
SYN1P17600 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
SYN1P17600 RNU6-107P-201ENST00000516643 102 ntBASIC3.13□□□□□ -1.91
SYN1P17600 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.13□□□□□ -1.91
SYN1P17600 CYP4A27P-201ENST00000567218 190 ntBASIC3.13□□□□□ -1.91
SYN1P17600 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.13□□□□□ -1.91
SYN1P17600 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYN1P17600 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.13□□□□□ -1.91
SYN1P17600 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.13□□□□□ -1.91
SYN1P17600 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SYN1P17600 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.12□□□□□ -1.91
SYN1P17600 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
SYN1P17600 AL135786.1-201ENST00000415892 214 ntBASIC3.12□□□□□ -1.91
SYN1P17600 Z98742.3-201ENST00000418637 326 ntBASIC3.12□□□□□ -1.91
SYN1P17600 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.12□□□□□ -1.91
SYN1P17600 AC103975.1-201ENST00000482506 483 ntBASIC3.12□□□□□ -1.91
SYN1P17600 Y_RNA.690-201ENST00000516603 95 ntBASIC3.12□□□□□ -1.91
SYN1P17600 RNU6-548P-201ENST00000517083 115 ntBASIC3.12□□□□□ -1.91
SYN1P17600 SCARNA20.6-201ENST00000517251 106 ntBASIC3.12□□□□□ -1.91
SYN1P17600 AL442128.1-201ENST00000615151 90 ntBASIC3.12□□□□□ -1.91
SYN1P17600 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.12□□□□□ -1.91
SYN1P17600 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.12□□□□□ -1.91
SYN1P17600 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
SYN1P17600 AC008264.2-201ENST00000610193 3731 ntBASIC3.11□□□□□ -1.91
SYN1P17600 Y_RNA.40-201ENST00000362645 93 ntBASIC3.11□□□□□ -1.91
SYN1P17600 Y_RNA.163-201ENST00000363702 113 ntBASIC3.11□□□□□ -1.91
SYN1P17600 Y_RNA.243-201ENST00000364481 109 ntBASIC3.11□□□□□ -1.91
SYN1P17600 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
SYN1P17600 SNORA51.5-201ENST00000384126 131 ntBASIC3.11□□□□□ -1.91
SYN1P17600 Y_RNA.456-201ENST00000384232 111 ntBASIC3.11□□□□□ -1.91
SYN1P17600 RNU6-1152P-201ENST00000384576 107 ntBASIC3.11□□□□□ -1.91
SYN1P17600 SNORD78.1-201ENST00000390866 65 ntBASIC3.11□□□□□ -1.91
SYN1P17600 RNU6-972P-201ENST00000391208 107 ntBASIC3.11□□□□□ -1.91
SYN1P17600 RNA5SP504-201ENST00000410676 117 ntBASIC3.11□□□□□ -1.91
SYN1P17600 AC019205.3-201ENST00000424573 156 ntBASIC3.11□□□□□ -1.91
SYN1P17600 AC109327.2-201ENST00000448339 378 ntBASIC3.11□□□□□ -1.91
SYN1P17600 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.11□□□□□ -1.91
SYN1P17600 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
SYN1P17600 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.11□□□□□ -1.91
SYN1P17600 MIR5688-201ENST00000580619 83 ntBASIC3.11□□□□□ -1.91
SYN1P17600 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SYN1P17600 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYN1P17600 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SYN1P17600 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYN1P17600 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SYN1P17600 RNU1-62P-201ENST00000362599 164 ntBASIC3.1□□□□□ -1.91
SYN1P17600 Y_RNA.85-201ENST00000363014 111 ntBASIC3.1□□□□□ -1.91
SYN1P17600 RNU5F-3P-201ENST00000363767 117 ntBASIC3.1□□□□□ -1.91
SYN1P17600 RNU6-647P-201ENST00000364243 107 ntBASIC3.1□□□□□ -1.91
SYN1P17600 SNORD114-30-201ENST00000364448 72 ntBASIC3.1□□□□□ -1.91
SYN1P17600 Y_RNA.346-201ENST00000365385 112 ntBASIC3.1□□□□□ -1.91
SYN1P17600 Y_RNA.361-201ENST00000365515 120 ntBASIC3.1□□□□□ -1.91
SYN1P17600 RNU6-440P-201ENST00000390882 105 ntBASIC3.1□□□□□ -1.91
SYN1P17600 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.1□□□□□ -1.91
SYN1P17600 RPL36AP48-201ENST00000485521 314 ntBASIC3.1□□□□□ -1.91
SYN1P17600 AC117454.1-201ENST00000491120 168 ntBASIC3.1□□□□□ -1.91
SYN1P17600 ATP5EP1-201ENST00000510257 156 ntBASIC3.1□□□□□ -1.91
SYN1P17600 RNU6-991P-201ENST00000516168 107 ntBASIC3.1□□□□□ -1.91
SYN1P17600 RNU6-109P-201ENST00000516364 107 ntBASIC3.1□□□□□ -1.91
SYN1P17600 RNU6-184P-201ENST00000516514 107 ntBASIC3.1□□□□□ -1.91
SYN1P17600 SCARNA11.3-201ENST00000517276 130 ntBASIC3.1□□□□□ -1.91
SYN1P17600 AC104027.1-201ENST00000521887 300 ntBASIC3.1□□□□□ -1.91
SYN1P17600 DEFB122-202ENST00000569013 197 ntBASIC3.1□□□□□ -1.91
SYN1P17600 UCA1.1-201ENST00000620952 75 ntBASIC3.1□□□□□ -1.91
SYN1P17600 AC002064.3-201ENST00000623448 346 ntBASIC3.1□□□□□ -1.91
SYN1P17600 SNORD98-201ENST00000636377 67 ntBASIC3.1□□□□□ -1.91
SYN1P17600 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
SYN1P17600 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYN1P17600 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYN1P17600 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
SYN1P17600 RNU6-1083P-201ENST00000384022 107 ntBASIC3.09□□□□□ -1.91
SYN1P17600 RNU1-57P-201ENST00000384491 166 ntBASIC3.09□□□□□ -1.91
SYN1P17600 SNORD12C-201ENST00000386307 89 ntBASIC3.09□□□□□ -1.91
SYN1P17600 AL603914.1-201ENST00000401964 204 ntBASIC3.09□□□□□ -1.91
SYN1P17600 RNU6-710P-201ENST00000410424 105 ntBASIC3.09□□□□□ -1.91
SYN1P17600 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
SYN1P17600 EDDM3CP-201ENST00000415977 425 ntBASIC3.09□□□□□ -1.91
SYN1P17600 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.09□□□□□ -1.91
SYN1P17600 SNORA40.13-201ENST00000516379 120 ntBASIC3.09□□□□□ -1.91
SYN1P17600 RNU6-56P-201ENST00000516986 93 ntBASIC3.09□□□□□ -1.91
SYN1P17600 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms