Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
MMP3P08254 RNU6-1266P-201ENST00000362794 105 ntBASIC2.06□□□□□ -2.08
MMP3P08254 SNORA33-201ENST00000363664 130 ntBASIC2.06□□□□□ -2.08
MMP3P08254 Y_RNA.243-201ENST00000364481 109 ntBASIC2.06□□□□□ -2.08
MMP3P08254 RNA5SP190-201ENST00000365222 118 ntBASIC2.06□□□□□ -2.08
MMP3P08254 Y_RNA.477-201ENST00000384352 108 ntBASIC2.06□□□□□ -2.08
MMP3P08254 Y_RNA.569-201ENST00000384749 103 ntBASIC2.06□□□□□ -2.08
MMP3P08254 AL627390.1-201ENST00000396055 340 ntBASIC2.06□□□□□ -2.08
MMP3P08254 AL390729.2-201ENST00000416137 156 ntBASIC2.06□□□□□ -2.08
MMP3P08254 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.06□□□□□ -2.08
MMP3P08254 SNORD13-201ENST00000459299 104 ntBASIC2.06□□□□□ -2.08
MMP3P08254 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.06□□□□□ -2.08
MMP3P08254 AC011406.1-201ENST00000512440 370 ntBASIC2.06□□□□□ -2.08
MMP3P08254 AC087441.2-201ENST00000529141 262 ntBASIC2.06□□□□□ -2.08
MMP3P08254 MIR3169-201ENST00000578032 83 ntBASIC2.06□□□□□ -2.08
MMP3P08254 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
MMP3P08254 AC012433.1-201ENST00000588916 398 ntBASIC2.06□□□□□ -2.08
MMP3P08254 AC010900.2-201ENST00000604508 210 ntBASIC2.06□□□□□ -2.08
MMP3P08254 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
MMP3P08254 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
MMP3P08254 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
MMP3P08254 AL391987.6-201ENST00000305671 199 ntBASIC2.05□□□□□ -2.08
MMP3P08254 MIR378A-201ENST00000362177 66 ntBASIC2.05□□□□□ -2.08
MMP3P08254 RNU6-1240P-201ENST00000365155 104 ntBASIC2.05□□□□□ -2.08
MMP3P08254 RNU6-417P-201ENST00000384712 107 ntBASIC2.05□□□□□ -2.08
MMP3P08254 RNA5SP270-201ENST00000411361 118 ntBASIC2.05□□□□□ -2.08
MMP3P08254 AC008134.1-201ENST00000420943 193 ntBASIC2.05□□□□□ -2.08
MMP3P08254 SNORD127-201ENST00000458892 86 ntBASIC2.05□□□□□ -2.08
MMP3P08254 AC010409.1-201ENST00000487382 476 ntBASIC2.05□□□□□ -2.08
MMP3P08254 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
MMP3P08254 AC107393.1-201ENST00000512403 346 ntBASIC2.05□□□□□ -2.08
MMP3P08254 Y_RNA.680-201ENST00000516441 93 ntBASIC2.05□□□□□ -2.08
MMP3P08254 SNORA25.15-201ENST00000516487 89 ntBASIC2.05□□□□□ -2.08
MMP3P08254 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
MMP3P08254 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
MMP3P08254 Y_RNA.307-201ENST00000365022 117 ntBASIC2.04□□□□□ -2.08
MMP3P08254 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
MMP3P08254 MIR518A2-201ENST00000384966 87 ntBASIC2.04□□□□□ -2.08
MMP3P08254 MIR1253-201ENST00000408273 105 ntBASIC2.04□□□□□ -2.08
MMP3P08254 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.04□□□□□ -2.08
MMP3P08254 MTCO1P5-201ENST00000433573 344 ntBASIC2.04□□□□□ -2.08
MMP3P08254 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
MMP3P08254 RPS27P22-201ENST00000478056 241 ntBASIC2.04□□□□□ -2.08
MMP3P08254 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
MMP3P08254 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
MMP3P08254 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
MMP3P08254 RNU2-31P-201ENST00000516954 155 ntBASIC2.04□□□□□ -2.08
MMP3P08254 RNU6-250P-201ENST00000516958 103 ntBASIC2.04□□□□□ -2.08
MMP3P08254 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.04□□□□□ -2.08
MMP3P08254 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.04□□□□□ -2.08
MMP3P08254 AP000942.4-201ENST00000604811 241 ntBASIC2.04□□□□□ -2.08
MMP3P08254 MIR8081-201ENST00000611533 95 ntBASIC2.04□□□□□ -2.08
MMP3P08254 AC022513.1-201ENST00000624512 117 ntBASIC2.04□□□□□ -2.08
MMP3P08254 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
MMP3P08254 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
MMP3P08254 RNU1-58P-201ENST00000362413 163 ntBASIC2.03□□□□□ -2.08
MMP3P08254 SNORA27.1-201ENST00000362604 124 ntBASIC2.03□□□□□ -2.08
MMP3P08254 Y_RNA.172-201ENST00000363765 102 ntBASIC2.03□□□□□ -2.08
MMP3P08254 RNU6-457P-201ENST00000363999 107 ntBASIC2.03□□□□□ -2.08
MMP3P08254 Y_RNA.287-201ENST00000364853 94 ntBASIC2.03□□□□□ -2.08
MMP3P08254 Y_RNA.556-201ENST00000384677 113 ntBASIC2.03□□□□□ -2.08
MMP3P08254 HMGN2P39-201ENST00000398005 273 ntBASIC2.03□□□□□ -2.08
MMP3P08254 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
MMP3P08254 AL135790.2-201ENST00000437701 267 ntBASIC2.03□□□□□ -2.08
MMP3P08254 AC245102.2-201ENST00000448956 180 ntBASIC2.03□□□□□ -2.08
MMP3P08254 RNU6-1132P-201ENST00000459214 107 ntBASIC2.03□□□□□ -2.08
MMP3P08254 RNU6-63P-201ENST00000516690 95 ntBASIC2.03□□□□□ -2.08
MMP3P08254 AC004817.2-201ENST00000561794 651 ntBASIC2.03□□□□□ -2.08
MMP3P08254 AC005828.6-201ENST00000606610 232 ntBASIC2.03□□□□□ -2.08
MMP3P08254 AC062037.2-201ENST00000610137 73 ntBASIC2.03□□□□□ -2.08
MMP3P08254 U6.104-201ENST00000637979 90 ntBASIC2.03□□□□□ -2.08
MMP3P08254 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
MMP3P08254 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
MMP3P08254 SNORA25.1-201ENST00000362326 128 ntBASIC2.02□□□□□ -2.09
MMP3P08254 Y_RNA.14-201ENST00000362415 103 ntBASIC2.02□□□□□ -2.09
MMP3P08254 Y_RNA.54-201ENST00000362766 105 ntBASIC2.02□□□□□ -2.09
MMP3P08254 RNU6-862P-201ENST00000362804 105 ntBASIC2.02□□□□□ -2.09
MMP3P08254 snoU2-30.2-201ENST00000362805 70 ntBASIC2.02□□□□□ -2.09
MMP3P08254 RNU11-3P-201ENST00000391111 133 ntBASIC2.02□□□□□ -2.09
MMP3P08254 SNORA53-201ENST00000391141 249 ntBASIC2.02□□□□□ -2.09
MMP3P08254 RNA5SP467-201ENST00000391274 118 ntBASIC2.02□□□□□ -2.09
MMP3P08254 MIR1287-201ENST00000408492 90 ntBASIC2.02□□□□□ -2.09
MMP3P08254 MIR1283-2-201ENST00000408621 87 ntBASIC2.02□□□□□ -2.09
MMP3P08254 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
MMP3P08254 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.02□□□□□ -2.09
MMP3P08254 ATP5J2P3-201ENST00000451550 258 ntBASIC2.02□□□□□ -2.09
MMP3P08254 RNU1-131P-201ENST00000458943 161 ntBASIC2.02□□□□□ -2.09
MMP3P08254 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
MMP3P08254 AC091959.1-201ENST00000495857 238 ntBASIC2.02□□□□□ -2.09
MMP3P08254 AC010598.1-201ENST00000510378 103 ntBASIC2.02□□□□□ -2.09
MMP3P08254 MTND1P19-201ENST00000511780 315 ntBASIC2.02□□□□□ -2.09
MMP3P08254 SERF1AP1-201ENST00000514575 187 ntBASIC2.02□□□□□ -2.09
MMP3P08254 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.02□□□□□ -2.09
MMP3P08254 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.02□□□□□ -2.09
MMP3P08254 MIR4438-201ENST00000585271 93 ntBASIC2.02□□□□□ -2.09
MMP3P08254 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
MMP3P08254 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.02□□□□□ -2.09
MMP3P08254 Y_RNA.361-201ENST00000365515 120 ntBASIC2.01□□□□□ -2.09
MMP3P08254 RNU6-662P-201ENST00000384253 104 ntBASIC2.01□□□□□ -2.09
MMP3P08254 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms