Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AC245884.12-201ENST00000615364 59 ntBASIC2.71□□□□□ -1.98
KLF4O43474 FTX_2.1-201ENST00000618816 94 ntBASIC2.71□□□□□ -1.98
KLF4O43474 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
KLF4O43474 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KLF4O43474 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KLF4O43474 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KLF4O43474 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
KLF4O43474 SNORA71.1-201ENST00000364523 117 ntBASIC2.7□□□□□ -1.98
KLF4O43474 Y_RNA.555-201ENST00000384673 110 ntBASIC2.7□□□□□ -1.98
KLF4O43474 MIR616-201ENST00000385293 97 ntBASIC2.7□□□□□ -1.98
KLF4O43474 SNORA48.1-201ENST00000390879 135 ntBASIC2.7□□□□□ -1.98
KLF4O43474 RNU6-381P-201ENST00000391259 108 ntBASIC2.7□□□□□ -1.98
KLF4O43474 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
KLF4O43474 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.7□□□□□ -1.98
KLF4O43474 RNU6-383P-201ENST00000410864 94 ntBASIC2.7□□□□□ -1.98
KLF4O43474 HMGN2P35-201ENST00000412164 270 ntBASIC2.7□□□□□ -1.98
KLF4O43474 BMS1P22-201ENST00000414726 313 ntBASIC2.7□□□□□ -1.98
KLF4O43474 MTND2P29-201ENST00000438595 412 ntBASIC2.7□□□□□ -1.98
KLF4O43474 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.7□□□□□ -1.98
KLF4O43474 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
KLF4O43474 Y_RNA.797-201ENST00000515977 94 ntBASIC2.7□□□□□ -1.98
KLF4O43474 Y_RNA.662-201ENST00000516028 97 ntBASIC2.7□□□□□ -1.98
KLF4O43474 RNU6-1291P-201ENST00000516591 104 ntBASIC2.7□□□□□ -1.98
KLF4O43474 RNU7-193P-201ENST00000516723 65 ntBASIC2.7□□□□□ -1.98
KLF4O43474 SNORA31.25-201ENST00000517242 134 ntBASIC2.7□□□□□ -1.98
KLF4O43474 RPL12P50-201ENST00000603116 116 ntBASIC2.7□□□□□ -1.98
KLF4O43474 AL033523.1-201ENST00000605153 153 ntBASIC2.7□□□□□ -1.98
KLF4O43474 AC022513.1-201ENST00000624512 117 ntBASIC2.7□□□□□ -1.98
KLF4O43474 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
KLF4O43474 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KLF4O43474 MIR22-201ENST00000362190 85 ntBASIC2.69□□□□□ -1.98
KLF4O43474 SNORA67.1-201ENST00000364749 141 ntBASIC2.69□□□□□ -1.98
KLF4O43474 Y_RNA.510-201ENST00000384511 114 ntBASIC2.69□□□□□ -1.98
KLF4O43474 RNU2-7P-201ENST00000410794 178 ntBASIC2.69□□□□□ -1.98
KLF4O43474 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.69□□□□□ -1.98
KLF4O43474 AL049830.1-201ENST00000468034 425 ntBASIC2.69□□□□□ -1.98
KLF4O43474 TRBV12-1-201ENST00000479785 344 ntBASIC2.69□□□□□ -1.98
KLF4O43474 AL929325.1-201ENST00000603096 117 ntBASIC2.69□□□□□ -1.98
KLF4O43474 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.69□□□□□ -1.98
KLF4O43474 AL391903.3-201ENST00000612158 163 ntBASIC2.69□□□□□ -1.98
KLF4O43474 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.69□□□□□ -1.98
KLF4O43474 AL137790.1-201ENST00000634283 177 ntBASIC2.69□□□□□ -1.98
KLF4O43474 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.68□□□□□ -1.98
KLF4O43474 RNU6-209P-201ENST00000384118 107 ntBASIC2.68□□□□□ -1.98
KLF4O43474 MT-TR-201ENST00000387439 65 ntBASIC2.68□□□□□ -1.98
KLF4O43474 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
KLF4O43474 SNORA11.2-201ENST00000408318 127 ntBASIC2.68□□□□□ -1.98
KLF4O43474 RNU2-2P-201ENST00000410396 191 ntBASIC2.68□□□□□ -1.98
KLF4O43474 AC245047.3-201ENST00000429428 127 ntBASIC2.68□□□□□ -1.98
KLF4O43474 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.68□□□□□ -1.98
KLF4O43474 RNA5SP76-201ENST00000516277 87 ntBASIC2.68□□□□□ -1.98
KLF4O43474 RNU7-28P-201ENST00000516759 62 ntBASIC2.68□□□□□ -1.98
KLF4O43474 MIR4744-201ENST00000581563 82 ntBASIC2.68□□□□□ -1.98
KLF4O43474 RNU2-4P-201ENST00000606190 192 ntBASIC2.68□□□□□ -1.98
KLF4O43474 MIR6852-201ENST00000621699 66 ntBASIC2.68□□□□□ -1.98
KLF4O43474 MIR203B-201ENST00000636080 86 ntBASIC2.68□□□□□ -1.98
KLF4O43474 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
KLF4O43474 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
KLF4O43474 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KLF4O43474 RNU1-35P-201ENST00000362782 153 ntBASIC2.67□□□□□ -1.98
KLF4O43474 Y_RNA.182-201ENST00000363880 111 ntBASIC2.67□□□□□ -1.98
KLF4O43474 RNY3P5-201ENST00000384127 102 ntBASIC2.67□□□□□ -1.98
KLF4O43474 MIR520A-201ENST00000384862 85 ntBASIC2.67□□□□□ -1.98
KLF4O43474 RNU6-1228P-201ENST00000391014 107 ntBASIC2.67□□□□□ -1.98
KLF4O43474 RN7SKP123-201ENST00000410732 291 ntBASIC2.67□□□□□ -1.98
KLF4O43474 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
KLF4O43474 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.67□□□□□ -1.98
KLF4O43474 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KLF4O43474 MIR4506-201ENST00000584693 77 ntBASIC2.67□□□□□ -1.98
KLF4O43474 SNORA28-201ENST00000606769 126 ntBASIC2.67□□□□□ -1.98
KLF4O43474 U6.106-201ENST00000636360 105 ntBASIC2.67□□□□□ -1.98
KLF4O43474 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
KLF4O43474 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KLF4O43474 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.66□□□□□ -1.98
KLF4O43474 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
KLF4O43474 Y_RNA.229-201ENST00000364347 113 ntBASIC2.66□□□□□ -1.98
KLF4O43474 Y_RNA.242-201ENST00000364473 110 ntBASIC2.66□□□□□ -1.98
KLF4O43474 RNU6-1080P-201ENST00000383982 107 ntBASIC2.66□□□□□ -1.98
KLF4O43474 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
KLF4O43474 RNA5SP501-201ENST00000410990 112 ntBASIC2.66□□□□□ -1.98
KLF4O43474 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.66□□□□□ -1.98
KLF4O43474 AC245047.8-201ENST00000456455 284 ntBASIC2.66□□□□□ -1.98
KLF4O43474 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.66□□□□□ -1.98
KLF4O43474 HMGN1P7-201ENST00000491722 313 ntBASIC2.66□□□□□ -1.98
KLF4O43474 RNU6-861P-201ENST00000516745 106 ntBASIC2.66□□□□□ -1.98
KLF4O43474 RPL23AP91-201ENST00000569211 455 ntBASIC2.66□□□□□ -1.98
KLF4O43474 CTSLP2-204ENST00000629029 392 ntBASIC2.66□□□□□ -1.98
KLF4O43474 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
KLF4O43474 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
KLF4O43474 Y_RNA.265-201ENST00000364677 108 ntBASIC2.65□□□□□ -1.99
KLF4O43474 SNORD23.1-201ENST00000408212 104 ntBASIC2.65□□□□□ -1.99
KLF4O43474 RNA5SP344-201ENST00000411081 104 ntBASIC2.65□□□□□ -1.99
KLF4O43474 RNA5SP450-201ENST00000411206 102 ntBASIC2.65□□□□□ -1.99
KLF4O43474 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
KLF4O43474 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.65□□□□□ -1.99
KLF4O43474 RPS27AP9-201ENST00000477681 438 ntBASIC2.65□□□□□ -1.99
KLF4O43474 RNVU1-2-201ENST00000516326 135 ntBASIC2.65□□□□□ -1.99
KLF4O43474 RNU2-19P-201ENST00000517288 84 ntBASIC2.65□□□□□ -1.99
KLF4O43474 MIR7106-201ENST00000612419 65 ntBASIC2.65□□□□□ -1.99
KLF4O43474 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 339.7 ms