Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR548L-201ENST00000408303 86 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC018865.2-201ENST00000423631 129 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 MTCO2P3-201ENST00000442543 421 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC091885.1-201ENST00000506658 268 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU6-612P-201ENST00000516909 102 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR3681-201ENST00000580089 72 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR378D2-201ENST00000580636 98 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC009159.2-201ENST00000617603 606 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC134878.1-201ENST00000619901 243 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 AC068137.4-201ENST00000638485 296 ntBASIC-1.11□□□□□ -2.59
CHKB-CPT1BH3BT56 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 RNY1P7-201ENST00000384743 110 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR487A-201ENST00000385009 80 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORA3B-201ENST00000391305 131 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 MCFD2P1-201ENST00000417812 300 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 AL358934.1-201ENST00000432346 324 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 AC107297.1-201ENST00000459991 176 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 AC079140.5-201ENST00000507882 310 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR5589-201ENST00000579442 60 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR4639-201ENST00000584938 69 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR6740-201ENST00000618268 113 ntBASIC-1.12□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU4-73P-201ENST00000363164 141 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.226-201ENST00000364337 114 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU6-117P-201ENST00000365415 107 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 MTCO1P20-201ENST00000425366 358 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 HMGN2P32-201ENST00000444648 269 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 RNA5SP20-201ENST00000515976 84 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORD45.4-201ENST00000516629 73 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 AC002044.1-201ENST00000606707 158 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 RMST_3.1-201ENST00000611651 109 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR6507-201ENST00000613630 70 ntBASIC-1.13□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 RNA5SP457-201ENST00000363657 124 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR876-201ENST00000401147 81 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 AL137792.2-201ENST00000443484 235 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 MTND2P3-201ENST00000452458 470 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 RNA5SP54-201ENST00000516951 92 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 AC022306.2-201ENST00000617563 647 ntBASIC-1.14□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR101-2-201ENST00000362195 79 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORA27.1-201ENST00000362604 124 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU6-266P-201ENST00000364225 107 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR450B-201ENST00000401182 78 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 AC010587.1-201ENST00000505809 469 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 AC010424.1-201ENST00000506336 297 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 AC010486.3-201ENST00000511602 785 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORA31.14-201ENST00000516728 116 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 LRRC34P1-201ENST00000542742 915 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 FGF7P1-201ENST00000582820 288 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 Z94722.1-201ENST00000604328 474 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 AL121992.2-201ENST00000606262 256 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORA70.25-201ENST00000612741 95 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 MIR8066-201ENST00000617280 78 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 AC013437.2-201ENST00000639587 677 ntBASIC-1.15□□□□□ -2.59
CHKB-CPT1BH3BT56 SNORD115-8-201ENST00000363856 82 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.269-201ENST00000364685 89 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 SNORD115-38-201ENST00000365037 82 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-407P-201ENST00000365280 104 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 MIR522-201ENST00000385071 87 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 AC090844.1-201ENST00000422019 156 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 AL355994.1-201ENST00000424379 260 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 AC119618.1-201ENST00000434191 222 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 RPL22P17-201ENST00000438729 315 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 MTATP6P26-201ENST00000445926 662 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 RPL39P5-202ENST00000512505 151 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.676-201ENST00000516393 96 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 MTND2P32-201ENST00000521584 1038 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 AP001328.1-201ENST00000528550 176 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 AC245008.1-201ENST00000608123 476 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 AC244669.1-204ENST00000621564 178 ntBASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.16□□□□□ -2.6
CHKB-CPT1BH3BT56 RNA5SP257-201ENST00000363023 116 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU7-73P-201ENST00000458743 63 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 AC018710.1-201ENST00000506509 158 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 AC074198.2-201ENST00000508153 258 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 AC116353.3-201ENST00000511215 249 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 298.5 ms