Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 Y_RNA.549-201ENST00000384657 102 ntBASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 MIR1302-4-201ENST00000408701 150 ntBASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 AL353689.1-201ENST00000438895 199 ntBASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 MIR5197-201ENST00000583721 112 ntBASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 AL353149.1-201ENST00000610667 244 ntBASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 ZNF271P-202ENST00000465539 1970 ntBASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHB11Q9Y5F2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 MIR126-201ENST00000362291 85 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 Y_RNA.267-201ENST00000364679 109 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 Y_RNA.328-201ENST00000365208 113 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 Y_RNA.348-201ENST00000365403 103 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 RNU6-756P-201ENST00000383997 107 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 RNU6-905P-201ENST00000384434 107 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 MIR634-201ENST00000385208 97 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 RNA5SP467-201ENST00000391274 118 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 AL591926.4-201ENST00000616895 298 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 MIR338-201ENST00000636369 67 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 MIR376A2-201ENST00000636782 80 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 U6.108-201ENST00000637764 58 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 AP000553.6-201ENST00000641242 118 ntBASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB11Q9Y5F2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 RNVU1-14-201ENST00000384770 164 ntBASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 RPS26P48-201ENST00000491713 339 ntBASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 AC023141.11-201ENST00000508864 202 ntBASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 MIR3200-201ENST00000580767 85 ntBASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 MIR7851-201ENST00000610611 160 ntBASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHB11Q9Y5F2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 MIR423-201ENST00000362201 94 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 RNA5SP51-201ENST00000364750 119 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 MIR522-201ENST00000385071 87 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 MIR1302-5-201ENST00000408164 150 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 RNU2-63P-201ENST00000410792 194 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 Z92545.1-201ENST00000411782 234 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 EDDM3CP-201ENST00000415977 425 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 AL159169.1-201ENST00000421119 127 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 FTH1P12-201ENST00000432137 551 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 RNU6-1041P-201ENST00000516254 102 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 MIR3922-201ENST00000585192 84 ntBASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PCDHB11Q9Y5F2 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 RNU6-640P-201ENST00000363693 105 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 RNU1-101P-201ENST00000391171 127 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 AL117342.1-201ENST00000404861 406 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 RHEBP3-201ENST00000411920 351 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 AL357552.1-201ENST00000445254 415 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 RN7SL601P-201ENST00000471221 293 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 RNU1-142P-201ENST00000516682 145 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 AC091544.4-201ENST00000555268 342 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 AC022217.4-201ENST00000604389 163 ntBASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.55□□□□□ -1.84
PCDHB11Q9Y5F2 Y_RNA.49-201ENST00000362714 112 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 SNORA51.5-201ENST00000384126 131 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 RNU6-240P-201ENST00000516098 97 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 AP002004.2-201ENST00000531656 154 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 AP001318.4-201ENST00000616637 121 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 AC134878.1-201ENST00000619901 243 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 AL035470.1-201ENST00000622571 220 ntBASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCDHB11Q9Y5F2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 SNORA1B-201ENST00000362535 133 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 Y_RNA.323-201ENST00000365157 109 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 RNU6-1014P-201ENST00000383940 103 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 Y_RNA.410-201ENST00000383992 113 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 MIR592-201ENST00000384959 97 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 MIR561-201ENST00000385216 97 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 SNORA11.2-201ENST00000408318 127 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 HMGN2P32-201ENST00000444648 269 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 AL049830.1-201ENST00000468034 425 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 262.8 ms