Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SNRPGP13-201ENST00000442212 177 ntBASIC3.68□□□□□ -1.82
PCDHB9Q9Y5E1 SCARNA15-202ENST00000516881 127 ntBASIC3.68□□□□□ -1.82
PCDHB9Q9Y5E1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHB9Q9Y5E1 AL359075.3-201ENST00000613288 217 ntBASIC3.68□□□□□ -1.82
PCDHB9Q9Y5E1 MIR6079-201ENST00000635807 62 ntBASIC3.68□□□□□ -1.82
PCDHB9Q9Y5E1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
PCDHB9Q9Y5E1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 RNU6-1107P-201ENST00000364817 104 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 SNORA48.2-201ENST00000390926 124 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 RNU6-554P-201ENST00000410466 106 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 AC007064.1-201ENST00000412238 351 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 AC023141.11-201ENST00000508864 202 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 RNU6-693P-201ENST00000516134 107 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 Y_RNA.677-201ENST00000516401 85 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 RN7SKP83-201ENST00000516512 178 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 RN7SKP282-201ENST00000516824 299 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 AC068657.1-201ENST00000520807 306 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 AC007012.1-201ENST00000567192 175 ntBASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB9Q9Y5E1 AC091152.2-201ENST00000591628 2569 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 RNA5SP125-201ENST00000364843 120 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 Y_RNA.369-201ENST00000365568 117 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 RNU1-101P-201ENST00000391171 127 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 COX6CP6-201ENST00000490840 228 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 AL353149.1-201ENST00000610667 244 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 AL137067.1-201ENST00000615933 120 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 MIR338-201ENST00000636369 67 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 U6.108-201ENST00000637764 58 ntBASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB9Q9Y5E1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PCDHB9Q9Y5E1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PCDHB9Q9Y5E1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PCDHB9Q9Y5E1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHB9Q9Y5E1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHB9Q9Y5E1 MIR126-201ENST00000362291 85 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 Y_RNA.85-201ENST00000363014 111 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 Y_RNA.267-201ENST00000364679 109 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 MIR518F-201ENST00000384973 87 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 MIR591-201ENST00000385290 95 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 RNA5SP467-201ENST00000391274 118 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 RNU2-63P-201ENST00000410792 194 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 RN7SL93P-201ENST00000463035 293 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 Y_RNA.714-201ENST00000517065 90 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 RNU6-537P-201ENST00000517277 103 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 AC106754.2-201ENST00000623006 233 ntBASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB9Q9Y5E1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 ZNF271P-202ENST00000465539 1970 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 SNORD9-201ENST00000362566 104 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 Y_RNA.366-201ENST00000365540 102 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 MIR490-201ENST00000384865 128 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 MIR128-1-201ENST00000384921 82 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 SNORD12C-201ENST00000386307 89 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 RNU6-1041P-201ENST00000516254 102 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 MIR4513-201ENST00000581077 86 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 MIR5197-201ENST00000583721 112 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 AL591926.4-201ENST00000616895 298 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 MAPK10-266ENST00000641066 6555 ntBASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PCDHB9Q9Y5E1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 RNU1-18P-201ENST00000363062 164 ntBASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 MIR592-201ENST00000384959 97 ntBASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 RNA5SP120-201ENST00000410900 112 ntBASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 MIR376A2-201ENST00000636782 80 ntBASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB9Q9Y5E1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 MIR522-201ENST00000385071 87 ntBASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 MIR561-201ENST00000385216 97 ntBASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 EDDM3CP-201ENST00000415977 425 ntBASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 FTH1P12-201ENST00000432137 551 ntBASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 AL357552.1-201ENST00000445254 415 ntBASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 RNU1-142P-201ENST00000516682 145 ntBASIC3.62□□□□□ -1.83
PCDHB9Q9Y5E1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 252.1 ms