Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 HMGN2P26-201ENST00000463169 339 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RNA5SP20-201ENST00000515976 84 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RNU6-341P-201ENST00000516973 96 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.61□□□□□ -2.31
TREX1Q9NSU2 AP002004.2-201ENST00000531656 154 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 MIR5696-201ENST00000578474 85 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 NBR2-204ENST00000587322 63 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 AL117336.2-201ENST00000602435 335 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 AC242852.1-201ENST00000612151 96 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 AC244015.1-201ENST00000622301 99 ntBASIC0.61□□□□□ -2.31
TREX1Q9NSU2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.61□□□□□ -2.31
TREX1Q9NSU2 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 SNORD116-9-201ENST00000384000 95 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 SNORD116-3-201ENST00000384287 95 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 SNORD116-7-201ENST00000384404 95 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 SNORD116-5-201ENST00000384462 95 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 RNA5SP482-201ENST00000391269 118 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 AC243428.1-201ENST00000421099 264 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 USP9YP16-201ENST00000430287 407 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.6□□□□□ -2.31
TREX1Q9NSU2 USP9YP23-201ENST00000455085 407 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 AL049830.1-201ENST00000468034 425 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.6□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.670-201ENST00000516255 105 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 RNU6-273P-201ENST00000516937 96 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 AC093023.1-201ENST00000547375 507 ntBASIC0.6□□□□□ -2.31
TREX1Q9NSU2 RNU6-222P-201ENST00000362438 107 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 SNORD116-11-201ENST00000383882 92 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 RNU6-281P-201ENST00000384212 103 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 SNORD116-13-201ENST00000384408 92 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 RNU6-136P-201ENST00000384663 107 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 SNORA75.2-201ENST00000391138 150 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 SNORA75.3-201ENST00000391231 150 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 RNU1-139P-201ENST00000391307 165 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 MTCYBP4-201ENST00000401524 249 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 RNU6-908P-201ENST00000410160 94 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 AC018865.2-201ENST00000423631 129 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 MTND3P23-201ENST00000431980 347 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 MTCO2P7-201ENST00000446518 666 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.59□□□□□ -2.31
TREX1Q9NSU2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.59□□□□□ -2.31
TREX1Q9NSU2 AC019235.1-201ENST00000503847 207 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 RNU6-1114P-201ENST00000516022 107 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.688-201ENST00000516565 95 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 Y_RNA.706-201ENST00000516933 99 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 RNU6-1116P-201ENST00000517269 99 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
TREX1Q9NSU2 CASC19-280ENST00000642102 1351 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AC073544.1-201ENST00000600110 1595 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.38-201ENST00000362617 102 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.135-201ENST00000363439 95 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.256-201ENST00000364594 104 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.414-201ENST00000384011 101 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.58□□□□□ -2.32
TREX1Q9NSU2 UQCRBP2-201ENST00000447827 297 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 RNU7-66P-201ENST00000459469 62 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AC046134.1-201ENST00000514454 666 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 RNA5SP255-201ENST00000516370 107 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 RN7SL793P-201ENST00000583259 296 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AC091178.2-201ENST00000584401 117 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 PRELID3BP2-201ENST00000605362 201 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AL096861.1-201ENST00000610899 123 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 AC007742.2-201ENST00000618226 398 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 ZNF299P-201ENST00000406845 1804 ntBASIC0.58□□□□□ -2.32
TREX1Q9NSU2 SNORA27.1-201ENST00000362604 124 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.48-201ENST00000362710 103 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.106-201ENST00000363189 100 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.57□□□□□ -2.32
TREX1Q9NSU2 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.57□□□□□ -2.32
TREX1Q9NSU2 MTATP6P17-201ENST00000431030 672 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.57□□□□□ -2.32
TREX1Q9NSU2 AC245047.8-201ENST00000456455 284 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 RNU6-1278P-201ENST00000516130 107 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 SNORD111.1-201ENST00000516421 86 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.57□□□□□ -2.32
TREX1Q9NSU2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.57□□□□□ -2.32
TREX1Q9NSU2 AC100812.1-201ENST00000607622 580 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 AC104465.1-201ENST00000611365 139 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 AC008133.2-201ENST00000624540 351 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.57□□□□□ -2.32
TREX1Q9NSU2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TREX1Q9NSU2 MIRLET7C-201ENST00000362160 84 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 RNU6-595P-201ENST00000363944 107 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 RNU6-110P-201ENST00000384508 104 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 RNU6-1105P-201ENST00000384774 107 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 MIR891A-201ENST00000401237 79 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 RNU6-1001P-201ENST00000411265 100 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.56□□□□□ -2.32
TREX1Q9NSU2 FABP5P4-201ENST00000437203 171 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 260.9 ms