Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
SIX2Q9NPC8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.77□□□□□ -2.13
SIX2Q9NPC8 RNU1-58P-201ENST00000362413 163 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 RNU4-90P-201ENST00000362773 141 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 RNU6-1266P-201ENST00000362794 105 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.84-201ENST00000363011 104 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 RNU6-23P-201ENST00000363283 107 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.144-201ENST00000363521 113 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 RNU6-472P-201ENST00000384299 107 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.541-201ENST00000384640 113 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 MIR518A2-201ENST00000384966 87 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 AL355796.1-201ENST00000406706 323 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 MIR1302-3-201ENST00000408128 138 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 CYCSP49-201ENST00000420810 319 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 SNORD65B-201ENST00000459126 73 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 AC011406.1-201ENST00000512440 370 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 RNU6-570P-201ENST00000517051 105 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.77□□□□□ -2.13
SIX2Q9NPC8 AC008749.1-201ENST00000597650 306 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 SDR42E1P4-201ENST00000620894 481 ntBASIC1.77□□□□□ -2.13
SIX2Q9NPC8 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.77□□□□□ -2.13
SIX2Q9NPC8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.376-201ENST00000365638 108 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.396-201ENST00000383949 103 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 SNORA20B-201ENST00000384220 132 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.461-201ENST00000384263 103 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 RNU6-196P-201ENST00000384315 107 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 RNU6-463P-201ENST00000384340 107 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 MT-TW-201ENST00000387382 68 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 SNORA40.19-201ENST00000390846 128 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 SNORA11.2-201ENST00000408318 127 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 MIR1283-2-201ENST00000408621 87 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 U3.40-201ENST00000408706 208 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 RNU6-1203P-201ENST00000410703 110 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 SUMO1P2-201ENST00000452524 304 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 snoU13.15-201ENST00000459407 104 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC010598.1-201ENST00000510378 103 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 RNU6-436P-201ENST00000516171 114 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 RNU7-193P-201ENST00000516723 65 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 SNORA31.25-201ENST00000517242 134 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC009127.3-201ENST00000570531 403 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AL353149.1-201ENST00000610667 244 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 7SK.10-201ENST00000621414 298 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC022513.1-201ENST00000624512 117 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 MIR203B-201ENST00000636080 86 ntBASIC1.76□□□□□ -2.13
SIX2Q9NPC8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SIX2Q9NPC8 snoU2-30.2-201ENST00000362805 70 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 RNU6-290P-201ENST00000365212 101 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 RNU6-574P-201ENST00000384265 107 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.483-201ENST00000384380 101 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 MIR524-201ENST00000385242 87 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 AL031003.1-201ENST00000404229 172 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 MIR1289-2-201ENST00000408360 111 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.75□□□□□ -2.13
SIX2Q9NPC8 AC096920.1-201ENST00000423991 241 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 HMGN2P34-201ENST00000437647 269 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 ATP5J2P3-201ENST00000451550 258 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 TRBVB-201ENST00000477100 408 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 RNU6-1041P-201ENST00000516254 102 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 RNU6-295P-201ENST00000516901 104 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 SUMO2P18-201ENST00000518873 252 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.75□□□□□ -2.13
SIX2Q9NPC8 MIR4503-201ENST00000582187 83 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 AC006435.5-201ENST00000624486 112 ntBASIC1.75□□□□□ -2.13
SIX2Q9NPC8 AL359851.1-201ENST00000569460 4997 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 SNORA27.1-201ENST00000362604 124 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.383-201ENST00000383855 97 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.518-201ENST00000384552 113 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 MIR597-201ENST00000384968 97 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SIX2Q9NPC8 RNA5SP465-201ENST00000391195 109 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 AL117342.1-201ENST00000404861 406 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 MIR1302-6-201ENST00000408466 90 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 RN7SKP101-201ENST00000411376 320 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 AL121890.1-201ENST00000435457 205 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 POLR2KP2-201ENST00000438155 177 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.74□□□□□ -2.13
SIX2Q9NPC8 RNU6-1146P-201ENST00000516282 102 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.74□□□□□ -2.13
SIX2Q9NPC8 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 AP001282.2-201ENST00000616149 309 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 MIR338-201ENST00000636369 67 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 CENPCP1-201ENST00000533085 2578 ntBASIC1.74□□□□□ -2.13
SIX2Q9NPC8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.16-201ENST00000362421 102 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 SNORD114-7-201ENST00000362520 77 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.124-201ENST00000363339 93 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 RNU6-324P-201ENST00000363957 106 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.287-201ENST00000364853 94 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.329-201ENST00000365209 107 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms