Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB4Q8WW32 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB4Q8WW32 U1.36-201ENST00000620684 176 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMGB4Q8WW32 AC092881.1-201ENST00000638218 2733 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 RNU6-1309P-201ENST00000363305 108 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.133-201ENST00000363428 110 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 SNORA80E-201ENST00000384744 137 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.574-201ENST00000384766 95 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 MIR215-201ENST00000384858 110 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 MIR515-2-201ENST00000384883 83 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 MIR515-1-201ENST00000384884 83 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 U8.13-201ENST00000390842 128 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 RPS27P22-201ENST00000478056 241 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 RNA5SP20-201ENST00000515976 84 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB4Q8WW32 AC023157.2-201ENST00000540596 141 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB4Q8WW32 MIR4438-201ENST00000585271 93 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGB4Q8WW32 AC245060.5-201ENST00000610778 3293 ntBASIC2.11□□□□□ -2.07
HMGB4Q8WW32 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGB4Q8WW32 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGB4Q8WW32 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RNU4-90P-201ENST00000362773 141 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RNU6-238P-201ENST00000363313 106 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.140-201ENST00000363474 103 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RNU6-324P-201ENST00000363957 106 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.329-201ENST00000365209 107 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RNU6-407P-201ENST00000365280 104 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.512-201ENST00000384518 102 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RNU2-61P-201ENST00000411069 191 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RPS26P55-201ENST00000471178 356 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGB4Q8WW32 RNU7-128P-201ENST00000517247 62 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB4Q8WW32 SUB1P4-201ENST00000566062 339 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 MIR5094-201ENST00000578766 85 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 AC005034.5-201ENST00000604219 466 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.783-201ENST00000613546 102 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 AC127459.3-201ENST00000624328 466 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 U6.108-201ENST00000637764 58 ntBASIC2.1□□□□□ -2.07
HMGB4Q8WW32 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGB4Q8WW32 ZNF720P1-201ENST00000562403 1939 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HMGB4Q8WW32 ZNF702P-202ENST00000434269 1966 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 AC010615.1-201ENST00000594254 1764 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HMGB4Q8WW32 RNU1-22P-201ENST00000363334 158 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.176-201ENST00000363815 109 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 AL355497.1-201ENST00000406262 551 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGB4Q8WW32 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGB4Q8WW32 SNORA70.12-201ENST00000516084 153 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 AC069114.2-201ENST00000604699 304 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 AL359075.3-201ENST00000613288 217 ntBASIC2.09□□□□□ -2.07
HMGB4Q8WW32 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGB4Q8WW32 RNA5SP276-201ENST00000362580 94 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.47-201ENST00000362697 108 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.84-201ENST00000363011 104 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.383-201ENST00000383855 97 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 RNU6-505P-201ENST00000384427 107 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.541-201ENST00000384640 113 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 RNU6-713P-201ENST00000384761 107 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 SNORA26.9-201ENST00000391322 122 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 AC019129.1-201ENST00000403786 261 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 EBAG9P1-201ENST00000418955 543 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 AC245047.4-201ENST00000433189 144 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 AC097462.1-201ENST00000514125 324 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 MTCO2P24-201ENST00000515611 426 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 AC024995.1-201ENST00000523014 93 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 DEFB117-201ENST00000602356 141 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 MIR8062-201ENST00000621515 85 ntBASIC2.08□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.149-201ENST00000363558 117 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 RNU6-1019P-201ENST00000364424 107 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 RNU6-290P-201ENST00000365212 101 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 RNU6-1186P-201ENST00000410429 97 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 MTCYBP9-201ENST00000431021 303 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 POLR2KP2-201ENST00000438155 177 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGB4Q8WW32 RPS26P45-201ENST00000471748 340 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 RNU7-99P-201ENST00000516271 62 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 RNU1-142P-201ENST00000516682 145 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 IGLV3-17-201ENST00000519099 244 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGB4Q8WW32 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGB4Q8WW32 AC084364.2-201ENST00000546924 395 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.07□□□□□ -2.08
HMGB4Q8WW32 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms