Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNU6-1123P-201ENST00000362347 106 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 RNU1-22P-201ENST00000363334 158 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 RNU6-454P-201ENST00000364292 107 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 SNORD81.2-201ENST00000365153 76 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 RNU6-1264P-201ENST00000383891 107 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 Y_RNA.498-201ENST00000384460 102 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 PGBD4P5-201ENST00000445958 426 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 COX6CP14-201ENST00000469580 174 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 RPL17P19-201ENST00000489069 552 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 AC097462.1-201ENST00000514125 324 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 RNU7-40P-201ENST00000516397 64 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 Y_RNA.691-201ENST00000516611 103 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 RNU7-172P-201ENST00000517125 64 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGCS1Q01581 AL512310.8-201ENST00000550183 120 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 AC099654.5-201ENST00000636479 350 ntBASIC0.98□□□□□ -2.25
HMGCS1Q01581 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
HMGCS1Q01581 Y_RNA.4-201ENST00000362333 112 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 RNU6-407P-201ENST00000365280 104 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 RNU6-370P-201ENST00000411008 104 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.97□□□□□ -2.25
HMGCS1Q01581 UBE2V1P7-201ENST00000446395 340 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 AC074133.1-201ENST00000515696 183 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 RNA5SP20-201ENST00000515976 84 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 RN7SKP49-201ENST00000516675 260 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 CYCSP23-201ENST00000519781 313 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 AC005899.2-201ENST00000584353 90 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
HMGCS1Q01581 AC006435.5-201ENST00000624486 112 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 MIR6079-201ENST00000635807 62 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 TPTEP1-208ENST00000636884 213 ntBASIC0.97□□□□□ -2.25
HMGCS1Q01581 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HMGCS1Q01581 SNORA27.1-201ENST00000362604 124 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 RNU6-1301P-201ENST00000362724 104 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 Y_RNA.646-201ENST00000410980 101 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 AC018865.2-201ENST00000423631 129 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 STAG3L5P-204ENST00000443759 179 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGCS1Q01581 MIR2053-201ENST00000459295 91 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 AC091021.1-201ENST00000468051 388 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGCS1Q01581 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGCS1Q01581 SNORA40.9-201ENST00000515895 93 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 MIR3664-201ENST00000579074 99 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 AC022306.2-201ENST00000617563 647 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 AC087588.2-201ENST00000617667 426 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 AC106754.2-201ENST00000623006 233 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 U6.115-201ENST00000636045 103 ntBASIC0.96□□□□□ -2.26
HMGCS1Q01581 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
HMGCS1Q01581 Y_RNA.124-201ENST00000363339 93 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 Y_RNA.166-201ENST00000363730 102 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 RNU6-310P-201ENST00000384655 107 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 MTCYBP4-201ENST00000401524 249 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 AL034345.1-201ENST00000407768 123 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 SNORD12B-201ENST00000410433 91 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 RNA5SP475-201ENST00000410568 110 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGCS1Q01581 MTCO3P19-201ENST00000415864 321 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 AC114482.1-201ENST00000418010 247 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 RAB28P5-201ENST00000427490 651 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 RNU6-625P-201ENST00000459412 107 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 RNU7-94P-201ENST00000459576 63 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 AC092991.1-201ENST00000477176 376 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.95□□□□□ -2.26
HMGCS1Q01581 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.95□□□□□ -2.26
HMGCS1Q01581 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGCS1Q01581 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 AC073349.3-201ENST00000617616 186 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 MIR8065-201ENST00000620577 100 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 SNORD3E-202ENST00000627253 216 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 MIR3674-201ENST00000636576 68 ntBASIC0.95□□□□□ -2.26
HMGCS1Q01581 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
HMGCS1Q01581 MIR410-201ENST00000362222 80 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 Y_RNA.164-201ENST00000363709 102 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 RNU6-1188P-201ENST00000363795 107 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 RNY3P11-201ENST00000364153 102 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 Y_RNA.267-201ENST00000364679 109 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGCS1Q01581 RNU6-505P-201ENST00000384427 107 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HMGCS1Q01581 Y_RNA.635-201ENST00000459041 101 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGCS1Q01581 AC022493.2-201ENST00000506122 481 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 RN7SKP88-201ENST00000516847 250 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 AC091178.2-201ENST00000584401 117 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 7SK.8-201ENST00000612110 250 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 7SK.11-201ENST00000615477 250 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 7SK.13-201ENST00000622040 250 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 AC068647.2-201ENST00000637380 353 ntBASIC0.94□□□□□ -2.26
HMGCS1Q01581 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms