Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 SNORA12.1-201ENST00000390873 148 ntBASIC4.83□□□□□ -1.64
CHGAP10645 RNA5SP39-201ENST00000411245 120 ntBASIC4.83□□□□□ -1.64
CHGAP10645 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.83□□□□□ -1.64
CHGAP10645 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.83□□□□□ -1.64
CHGAP10645 Y_RNA.677-201ENST00000516401 85 ntBASIC4.83□□□□□ -1.64
CHGAP10645 AC026333.2-201ENST00000542164 106 ntBASIC4.83□□□□□ -1.64
CHGAP10645 AL359075.3-201ENST00000613288 217 ntBASIC4.83□□□□□ -1.64
CHGAP10645 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.83□□□□□ -1.64
CHGAP10645 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.82□□□□□ -1.64
CHGAP10645 MFSD8-233ENST00000641482 4860 ntBASIC4.82□□□□□ -1.64
CHGAP10645 SNORA68.1-201ENST00000364537 132 ntBASIC4.82□□□□□ -1.64
CHGAP10645 RNA5SP125-201ENST00000364843 120 ntBASIC4.82□□□□□ -1.64
CHGAP10645 RNU6-106P-201ENST00000384405 107 ntBASIC4.82□□□□□ -1.64
CHGAP10645 MIR570-201ENST00000384917 97 ntBASIC4.82□□□□□ -1.64
CHGAP10645 SNORD72-201ENST00000390994 80 ntBASIC4.82□□□□□ -1.64
CHGAP10645 RN7SKP282-201ENST00000516824 299 ntBASIC4.82□□□□□ -1.64
CHGAP10645 RNU6-341P-201ENST00000516973 96 ntBASIC4.82□□□□□ -1.64
CHGAP10645 RNU7-128P-201ENST00000517247 62 ntBASIC4.82□□□□□ -1.64
CHGAP10645 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.82□□□□□ -1.64
CHGAP10645 AC007012.1-201ENST00000567192 175 ntBASIC4.82□□□□□ -1.64
CHGAP10645 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.82□□□□□ -1.64
CHGAP10645 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.82□□□□□ -1.64
CHGAP10645 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHGAP10645 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.82□□□□□ -1.64
CHGAP10645 AC093908.1-201ENST00000623125 8092 ntBASIC4.82□□□□□ -1.64
CHGAP10645 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.82□□□□□ -1.64
CHGAP10645 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHGAP10645 SNORA80A-201ENST00000363922 136 ntBASIC4.81□□□□□ -1.64
CHGAP10645 Y_RNA.369-201ENST00000365568 117 ntBASIC4.81□□□□□ -1.64
CHGAP10645 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHGAP10645 RNU6-301P-201ENST00000384277 107 ntBASIC4.81□□□□□ -1.64
CHGAP10645 RPL23AP48-201ENST00000406913 488 ntBASIC4.81□□□□□ -1.64
CHGAP10645 SNRPGP13-201ENST00000442212 177 ntBASIC4.81□□□□□ -1.64
CHGAP10645 VWA8P1-201ENST00000510889 176 ntBASIC4.81□□□□□ -1.64
CHGAP10645 RNU6-693P-201ENST00000516134 107 ntBASIC4.81□□□□□ -1.64
CHGAP10645 Y_RNA.666-201ENST00000516187 112 ntBASIC4.81□□□□□ -1.64
CHGAP10645 RNU6-1149P-201ENST00000516810 97 ntBASIC4.81□□□□□ -1.64
CHGAP10645 AC106754.2-201ENST00000623006 233 ntBASIC4.81□□□□□ -1.64
CHGAP10645 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHGAP10645 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHGAP10645 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGAP10645 RNU6-1107P-201ENST00000364817 104 ntBASIC4.8□□□□□ -1.64
CHGAP10645 SNORD6-201ENST00000365444 73 ntBASIC4.8□□□□□ -1.64
CHGAP10645 CD24P4-201ENST00000382840 243 ntBASIC4.8□□□□□ -1.64
CHGAP10645 RNU2-48P-201ENST00000410694 191 ntBASIC4.8□□□□□ -1.64
CHGAP10645 CALM2P4-201ENST00000430810 426 ntBASIC4.8□□□□□ -1.64
CHGAP10645 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.8□□□□□ -1.64
CHGAP10645 RNU6-1291P-201ENST00000516591 104 ntBASIC4.8□□□□□ -1.64
CHGAP10645 RNU6-537P-201ENST00000517277 103 ntBASIC4.8□□□□□ -1.64
CHGAP10645 MIR6079-201ENST00000635807 62 ntBASIC4.8□□□□□ -1.64
CHGAP10645 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGAP10645 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHGAP10645 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGAP10645 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.8□□□□□ -1.64
CHGAP10645 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CHGAP10645 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHGAP10645 RNA5SP432-201ENST00000362480 116 ntBASIC4.79□□□□□ -1.64
CHGAP10645 SNORD77.3-201ENST00000391113 65 ntBASIC4.79□□□□□ -1.64
CHGAP10645 RNU2-63P-201ENST00000410792 194 ntBASIC4.79□□□□□ -1.64
CHGAP10645 RNU4-47P-201ENST00000410876 114 ntBASIC4.79□□□□□ -1.64
CHGAP10645 AL353689.1-201ENST00000438895 199 ntBASIC4.79□□□□□ -1.64
CHGAP10645 COX6CP6-201ENST00000490840 228 ntBASIC4.79□□□□□ -1.64
CHGAP10645 AL137067.1-201ENST00000615933 120 ntBASIC4.79□□□□□ -1.64
CHGAP10645 AL137790.1-201ENST00000634283 177 ntBASIC4.79□□□□□ -1.64
CHGAP10645 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHGAP10645 AC068647.1-201ENST00000489539 2265 ntBASIC4.79□□□□□ -1.64
CHGAP10645 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.78□□□□□ -1.64
CHGAP10645 AC006989.1-201ENST00000427212 131 ntBASIC4.78□□□□□ -1.64
CHGAP10645 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.78□□□□□ -1.64
CHGAP10645 RN7SL863P-201ENST00000462370 296 ntBASIC4.78□□□□□ -1.64
CHGAP10645 SCARNA15-202ENST00000516881 127 ntBASIC4.78□□□□□ -1.64
CHGAP10645 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
CHGAP10645 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHGAP10645 MAPK10-253ENST00000641010 4072 ntBASIC4.77□□□□□ -1.65
CHGAP10645 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHGAP10645 ZNF271P-202ENST00000465539 1970 ntBASIC4.77□□□□□ -1.65
CHGAP10645 Y_RNA.85-201ENST00000363014 111 ntBASIC4.77□□□□□ -1.65
CHGAP10645 RNU1-101P-201ENST00000391171 127 ntBASIC4.77□□□□□ -1.65
CHGAP10645 RNU6-554P-201ENST00000410466 106 ntBASIC4.77□□□□□ -1.65
CHGAP10645 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.77□□□□□ -1.65
CHGAP10645 AL033523.1-201ENST00000605153 153 ntBASIC4.77□□□□□ -1.65
CHGAP10645 AL353149.1-201ENST00000610667 244 ntBASIC4.77□□□□□ -1.65
CHGAP10645 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHGAP10645 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHGAP10645 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHGAP10645 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHGAP10645 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHGAP10645 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
CHGAP10645 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHGAP10645 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHGAP10645 MIR126-201ENST00000362291 85 ntBASIC4.76□□□□□ -1.65
CHGAP10645 MIR548A2-201ENST00000384956 97 ntBASIC4.76□□□□□ -1.65
CHGAP10645 MIR561-201ENST00000385216 97 ntBASIC4.76□□□□□ -1.65
CHGAP10645 SNORD12C-201ENST00000386307 89 ntBASIC4.76□□□□□ -1.65
CHGAP10645 AL357552.1-201ENST00000445254 415 ntBASIC4.76□□□□□ -1.65
CHGAP10645 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.76□□□□□ -1.65
CHGAP10645 AC023141.11-201ENST00000508864 202 ntBASIC4.76□□□□□ -1.65
CHGAP10645 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.76□□□□□ -1.65
CHGAP10645 AC068657.1-201ENST00000520807 306 ntBASIC4.76□□□□□ -1.65
CHGAP10645 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms