Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SNORD65B-201ENST00000459126 73 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR2053-201ENST00000459295 91 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC022868.1-201ENST00000517767 391 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORA77B-201ENST00000578179 125 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.804-201ENST00000615262 101 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR6734-201ENST00000621166 68 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC073544.1-201ENST00000600110 1595 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC010615.1-201ENST00000594254 1764 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-961P-201ENST00000363893 105 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-1240P-201ENST00000365155 104 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.384-201ENST00000383909 102 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR489-201ENST00000384923 84 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORA12.1-201ENST00000390873 148 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 RPL23AP50-201ENST00000434149 455 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 COX6CP14-201ENST00000469580 174 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC074133.1-201ENST00000515696 183 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-966P-201ENST00000516479 104 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC018448.1-201ENST00000552843 316 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC016925.2-201ENST00000605108 242 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC005828.6-201ENST00000606610 232 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.17□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU5F-3P-201ENST00000363767 117 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-879P-201ENST00000364328 108 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.252-201ENST00000364556 101 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORA4.2-201ENST00000365313 147 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORA69.1-201ENST00000390904 137 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.579-201ENST00000390939 94 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL161935.2-201ENST00000414627 60 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC114482.1-201ENST00000418010 247 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC096644.2-201ENST00000429278 159 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RPS4XP11-201ENST00000446897 772 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RPS26P45-201ENST00000471748 340 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC010469.2-201ENST00000496412 480 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORA40.9-201ENST00000515895 93 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-1012P-201ENST00000516606 109 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU4-77P-201ENST00000516692 156 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR2355-201ENST00000517199 87 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 CYCSP23-201ENST00000519781 313 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL442163.3-201ENST00000554110 156 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 U6.73-201ENST00000619194 103 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC095038.3-201ENST00000634439 195 ntBASIC1.16□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-867P-201ENST00000364956 107 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORD42.2-201ENST00000365570 69 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-1264P-201ENST00000383891 107 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.394-201ENST00000383942 103 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.395-201ENST00000383945 109 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.419-201ENST00000384041 102 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNY3P4-201ENST00000384428 101 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORD12B-201ENST00000410433 91 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 RAB28P5-201ENST00000427490 651 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 TOMM22P2-201ENST00000430735 237 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC005002.2-201ENST00000438228 269 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL163195.1-201ENST00000496941 348 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-264P-201ENST00000517134 104 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC011604.1-201ENST00000545978 196 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR4422-201ENST00000581938 83 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC022217.4-201ENST00000604389 163 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC069114.2-201ENST00000604699 304 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL133255.1-201ENST00000606374 441 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORD58B-201ENST00000607313 66 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR4272-201ENST00000635924 64 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 MTND4P29-201ENST00000503122 1372 ntBASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.243-201ENST00000364481 109 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORA20B-201ENST00000384220 132 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR194-1-201ENST00000384892 85 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR625-201ENST00000385047 85 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-1199P-201ENST00000411249 104 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 MTCO2P27-201ENST00000420740 428 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC008134.1-201ENST00000420943 193 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 HSPE1P9-201ENST00000440046 311 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL137792.2-201ENST00000443484 235 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 UBE2V1P7-201ENST00000446395 340 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 UQCRBP2-201ENST00000447827 297 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU7-169P-201ENST00000459456 61 ntBASIC1.14□□□□□ -2.23
TMX2-CTNND1H3BSU7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 228.8 ms