Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC091179.3-201ENST00000474761 144 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AC133485.4-201ENST00000561835 220 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AC010525.2-201ENST00000590920 195 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AC008608.1-201ENST00000603910 127 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AC018714.1-201ENST00000605028 208 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AL021368.1-201ENST00000607490 540 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AC022306.3-201ENST00000619930 550 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 SNORA18.1-201ENST00000363418 128 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-407P-201ENST00000365280 104 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 MIR106A-201ENST00000384870 81 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 MIR489-201ENST00000384923 84 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-205P-201ENST00000390858 107 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 AL353572.1-201ENST00000442490 417 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 USP9YP12-201ENST00000450481 570 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 AC079354.2-201ENST00000453523 154 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 AC018710.1-201ENST00000506509 158 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-848P-201ENST00000515948 107 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU4-49P-201ENST00000516080 140 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-617P-201ENST00000516147 107 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-473P-201ENST00000516164 107 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RN7SKP287-201ENST00000516546 266 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 AP000811.1-201ENST00000603803 651 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 U2.17-201ENST00000611454 95 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 AC027807.2-201ENST00000616099 408 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 AL109933.3-201ENST00000619095 188 ntBASIC-0.57□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-873P-201ENST00000363833 107 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 RNA5SP117-201ENST00000365294 118 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 SNORA2A-201ENST00000383885 135 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-784P-201ENST00000384330 106 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 MIR760-201ENST00000390220 80 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-269P-201ENST00000391077 97 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU2-54P-201ENST00000410299 190 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 MTCO2P11-201ENST00000431069 680 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 ZNF114P1-201ENST00000453500 292 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 TRBVB-201ENST00000477100 408 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 SCARNA8-201ENST00000515924 131 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 AC091144.1-201ENST00000519573 138 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 AP000753.3-201ENST00000604083 169 ntBASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.58□□□□□ -2.5
TRAV13-1A0A0B4J241 SNORA27.1-201ENST00000362604 124 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 SNORA72.1-201ENST00000363485 129 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 RNA5SP275-201ENST00000363936 118 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-108P-201ENST00000365558 107 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 MIR1-2-201ENST00000384961 85 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 MLLT10P1-201ENST00000418346 262 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 AL137792.2-201ENST00000443484 235 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU7-165P-201ENST00000458864 60 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-782P-201ENST00000516852 104 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 SCOCP1-201ENST00000554676 349 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 AC064836.2-201ENST00000609491 462 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 AL591926.4-201ENST00000616895 298 ntBASIC-0.59□□□□□ -2.5
TRAV13-1A0A0B4J241 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-117P-201ENST00000365415 107 ntBASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-83P-201ENST00000384568 112 ntBASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORD28B-201ENST00000390993 75 ntBASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 AC096531.1-201ENST00000419107 107 ntBASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU7-102P-201ENST00000458948 62 ntBASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.6□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORD114-31-201ENST00000363219 75 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORA1.1-201ENST00000364671 133 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORD114-12-201ENST00000365400 75 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 BTF3P11-201ENST00000426582 477 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 AL158211.1-201ENST00000566763 763 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR548AR-201ENST00000582191 57 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR4264-201ENST00000583520 66 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR7107-201ENST00000611489 80 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 AC127459.3-201ENST00000624328 466 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 AC006927.3-201ENST00000638789 384 ntBASIC-0.61□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORD114-28-201ENST00000363610 72 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-187P-201ENST00000384139 106 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-606P-201ENST00000384721 111 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR329-2-201ENST00000385029 84 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-447P-201ENST00000410293 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-355P-201ENST00000410427 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-791P-201ENST00000410467 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-705P-201ENST00000410601 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-860P-201ENST00000410860 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-785P-201ENST00000411324 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 SSR1P2-201ENST00000415208 787 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 AL512286.1-201ENST00000439244 400 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms