Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RN7SKP49-201ENST00000516675 260 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 MIR4709-201ENST00000577272 72 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC015688.6-201ENST00000577737 104 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 MIR4438-201ENST00000585271 93 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AL132765.2-201ENST00000610812 351 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC133104.2-201ENST00000615272 193 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 U6.108-201ENST00000637764 58 ntBASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
ATG4BQ9Y4P1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-1301P-201ENST00000362724 104 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-203P-201ENST00000384038 104 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-926P-201ENST00000384075 107 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 RPL21P1-201ENST00000399532 476 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 SNORD12B-201ENST00000410433 91 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 MRPS18CP6-201ENST00000423587 223 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AC010154.1-201ENST00000425857 269 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AC093019.1-201ENST00000443135 252 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-507P-201ENST00000516045 100 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 SUB1P3-201ENST00000564581 315 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 MIR548S-201ENST00000581352 82 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AC087588.2-201ENST00000617667 426 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 U6.73-201ENST00000619194 103 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 AC006435.5-201ENST00000624486 112 ntBASIC1.37□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.314-201ENST00000365114 102 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-407P-201ENST00000365280 104 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.356-201ENST00000365475 113 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 SNORD116-29-201ENST00000384516 83 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 RNY4P36-201ENST00000391116 96 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.592-201ENST00000410274 109 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 RNA5SP475-201ENST00000410568 110 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.605-201ENST00000410577 105 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 MTND4P28-201ENST00000426217 387 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 MRPS10P1-201ENST00000448483 130 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 AC079140.2-201ENST00000506193 142 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 AC074133.1-201ENST00000515696 183 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-875P-201ENST00000516488 106 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 RNU7-128P-201ENST00000517247 62 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 AL355375.2-201ENST00000574825 175 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 AL929325.1-201ENST00000603096 117 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 AC080078.3-201ENST00000605407 463 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 AC084781.2-201ENST00000615568 161 ntBASIC1.36□□□□□ -2.19
ATG4BQ9Y4P1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 SNORA20B-201ENST00000384220 132 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 RAB28P5-201ENST00000427490 651 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 AC245047.3-201ENST00000429428 127 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 AC010598.1-201ENST00000510378 103 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 RNU7-4P-201ENST00000516961 62 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 AC144568.1-201ENST00000520139 137 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 RAB11AP2-201ENST00000545905 639 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 MIR4498-201ENST00000577599 66 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 MIR3684-201ENST00000579779 74 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 AC022217.4-201ENST00000604389 163 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 AC025253.1-201ENST00000613623 543 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 MIR628-201ENST00000385229 95 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-1009P-201ENST00000390996 107 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AL355796.1-201ENST00000406706 323 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AC004965.1-201ENST00000413033 213 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 RPL23AP36-201ENST00000413895 458 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 RPS27P1-201ENST00000450552 247 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 ELOCP24-201ENST00000456370 334 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 RNU6-408P-201ENST00000515910 100 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 RNU7-99P-201ENST00000516271 62 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 Y_RNA.718-201ENST00000517110 102 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 MIR2355-201ENST00000517199 87 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AP002001.1-203ENST00000534002 267 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 AC073413.2-201ENST00000604332 360 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 MIR3674-201ENST00000636576 68 ntBASIC1.34□□□□□ -2.19
ATG4BQ9Y4P1 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.529-201ENST00000384586 119 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 RNU11-5P-201ENST00000391216 129 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 AC096644.2-201ENST00000429278 159 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 MTND5P20-201ENST00000448677 143 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms