Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-57P-201ENST00000411348 103 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 AC096920.1-201ENST00000423991 241 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 SNORD127-201ENST00000458892 86 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-155P-201ENST00000516347 100 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 AC023157.2-201ENST00000540596 141 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 AC062037.2-201ENST00000610137 73 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.15-201ENST00000611544 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.16-201ENST00000613119 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.12-201ENST00000613778 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.20-201ENST00000613956 192 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.9-201ENST00000615427 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 MIR6715A-201ENST00000615929 79 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.11-201ENST00000616345 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.2-201ENST00000616535 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.3-201ENST00000617785 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.19-201ENST00000618602 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 RNU2-1-201ENST00000618664 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.6-201ENST00000619225 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.5-201ENST00000619465 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 U2.10-201ENST00000620268 191 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 RNU4-90P-201ENST00000362773 141 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 RPL23AP36-201ENST00000413895 458 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 TOMM22P2-201ENST00000430735 237 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 NDUFB4P10-201ENST00000452541 359 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 AL137159.1-201ENST00000452808 512 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 AC005042.3-201ENST00000453230 174 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 AC010531.2-201ENST00000465012 153 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-1338P-201ENST00000516328 91 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 RNU2-12P-201ENST00000517216 168 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 AC007229.1-201ENST00000590455 412 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 AC022202.1-201ENST00000613515 211 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 MIR219B-201ENST00000637023 88 ntBASIC2.04□□□□□ -2.08
SMARCAL1Q9NZC9 AL391987.6-201ENST00000305671 199 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 MIR340-201ENST00000362125 95 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 U8.2-201ENST00000363156 134 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.307-201ENST00000365022 117 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-290P-201ENST00000365212 101 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.401-201ENST00000383965 117 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 RNU1-148P-201ENST00000384472 162 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 RNU2-54P-201ENST00000410299 190 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AL390729.2-201ENST00000416137 156 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC123900.1-201ENST00000420390 96 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC139712.2-201ENST00000424302 339 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 MRPS10P1-201ENST00000448483 130 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-1132P-201ENST00000459214 107 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC114982.1-201ENST00000469402 321 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC055731.1-201ENST00000474387 401 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.680-201ENST00000516441 93 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 MIR3145-201ENST00000580727 82 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC012433.1-201ENST00000588916 398 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 AC006006.1-201ENST00000603082 144 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 U4atac.1-201ENST00000618345 95 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 snoZ196.1-201ENST00000625269 89 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 U6.104-201ENST00000637979 90 ntBASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.14-201ENST00000362415 103 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.383-201ENST00000383855 97 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.477-201ENST00000384352 108 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 MTCO1P44-201ENST00000441935 243 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 SNORA31.25-201ENST00000517242 134 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 AC110588.1-201ENST00000559699 137 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 AC006380.1-201ENST00000603598 186 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 AL590240.4-201ENST00000616908 390 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 SDR42E1P4-201ENST00000620894 481 ntBASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SMARCAL1Q9NZC9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6-324P-201ENST00000363957 106 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.569-201ENST00000384749 103 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 RN7SKP192-201ENST00000411291 327 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 POLR2KP2-201ENST00000438155 177 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6-221P-201ENST00000459541 99 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 MTND1P19-201ENST00000511780 315 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms