Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 COX6CP10-201ENST00000416832 224 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.05□□□□□ -2.24
FOXC2Q99958 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.05□□□□□ -2.24
FOXC2Q99958 MTND3P10-201ENST00000450967 341 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 AC107399.1-201ENST00000451226 265 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.05□□□□□ -2.24
FOXC2Q99958 AC114982.1-201ENST00000469402 321 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 HMGN1P12-201ENST00000499125 195 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 AC103851.1-201ENST00000506833 274 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 Y_RNA.708-201ENST00000516950 96 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 RN7SL793P-201ENST00000583259 296 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 MZT1P2-201ENST00000604387 248 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 AC100812.1-201ENST00000607622 580 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 AC009229.3-201ENST00000608056 282 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 AC099654.14-201ENST00000638599 341 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
FOXC2Q99958 Y_RNA.106-201ENST00000363189 100 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 SNORA33-201ENST00000363664 130 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 RNU6-280P-201ENST00000364145 104 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 SNORD87-201ENST00000364849 89 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 RNU6-793P-201ENST00000384233 104 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 RNU6-1145P-201ENST00000384246 107 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 RNU6-601P-201ENST00000384540 107 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 RNU6-331P-201ENST00000384724 107 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 MIR329-1-201ENST00000385028 80 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 MIR625-201ENST00000385047 85 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
FOXC2Q99958 MIR190B-201ENST00000401119 79 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXC2Q99958 SNX2P2-201ENST00000424553 323 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 USMG5P1-201ENST00000425964 177 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXC2Q99958 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.04□□□□□ -2.24
FOXC2Q99958 RNU6-1114P-201ENST00000516022 107 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 CYP3A52P-201ENST00000563326 91 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.04□□□□□ -2.24
FOXC2Q99958 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 AC125232.2-201ENST00000592457 143 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 AL078596.1-201ENST00000624856 447 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.04□□□□□ -2.24
FOXC2Q99958 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
FOXC2Q99958 RNU6-222P-201ENST00000362438 107 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 RNY1P16-201ENST00000363063 111 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 Y_RNA.179-201ENST00000363844 90 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 Y_RNA.364-201ENST00000365532 101 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 Y_RNA.415-201ENST00000384012 112 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 MIR515-2-201ENST00000384883 83 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 MIR515-1-201ENST00000384884 83 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 RNU6-876P-201ENST00000391295 104 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 RNU6-57P-201ENST00000411348 103 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 AL445305.1-201ENST00000432577 575 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.03□□□□□ -2.24
FOXC2Q99958 RPL31P58-201ENST00000469001 379 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 RPL7P42-201ENST00000481005 679 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.03□□□□□ -2.24
FOXC2Q99958 RNU6-1146P-201ENST00000516282 102 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 RNU7-128P-201ENST00000517247 62 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.03□□□□□ -2.24
FOXC2Q99958 FRG2DP-202ENST00000566967 323 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 MIR4709-201ENST00000577272 72 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 7SK.7-201ENST00000603504 247 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 AL355073.2-201ENST00000612106 557 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 TPTEP1-208ENST00000636884 213 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 MTND5P16-201ENST00000460269 1703 ntBASIC1.03□□□□□ -2.24
FOXC2Q99958 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
FOXC2Q99958 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 RNU5F-3P-201ENST00000363767 117 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 RNU6-1240P-201ENST00000365155 104 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 SNORA4.2-201ENST00000365313 147 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 Y_RNA.557-201ENST00000384680 107 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 RNU6-541P-201ENST00000384709 110 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 MIR758-201ENST00000390227 88 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
FOXC2Q99958 SNORA75.4-201ENST00000391278 119 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 ELOCP21-201ENST00000412558 336 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 POLR2J4-204ENST00000418424 324 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
FOXC2Q99958 AC005534.2-201ENST00000431047 433 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 MTND4P18-201ENST00000447010 465 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 RPS27P1-201ENST00000450552 247 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 U8.22-201ENST00000459141 133 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 PRDX4P1-201ENST00000507189 574 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 RNU1-117P-201ENST00000517041 158 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
FOXC2Q99958 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 AL442163.3-201ENST00000554110 156 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 AC090617.3-201ENST00000573670 475 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 MIR5000-201ENST00000577717 103 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 AC010999.1-201ENST00000611856 324 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 MIR8065-201ENST00000620577 100 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.02□□□□□ -2.25
FOXC2Q99958 AC099654.5-201ENST00000636479 350 ntBASIC1.02□□□□□ -2.25
FOXC2Q99958 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
FOXC2Q99958 MIR410-201ENST00000362222 80 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms