Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MTCO1P5-201ENST00000433573 344 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 AC004386.2-201ENST00000441858 148 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 AL360271.2-201ENST00000447710 161 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 RNU7-102P-201ENST00000458948 62 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 AC091951.3-201ENST00000504093 246 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 RNU2-56P-201ENST00000516826 190 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 MIR4438-201ENST00000585271 93 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 AC010525.2-201ENST00000590920 195 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 AC138649.3-201ENST00000622154 254 ntBASIC-1.08□□□□□ -2.58
ABCA3Q99758 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 RNA5SP48-201ENST00000363969 126 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 RNU6-883P-201ENST00000384597 107 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 SNORA3B-201ENST00000391305 131 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 AL512326.2-201ENST00000426359 151 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 MIR2115-201ENST00000516657 100 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.09□□□□□ -2.58
ABCA3Q99758 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.09□□□□□ -2.58
ABCA3Q99758 RPL21P9-201ENST00000556149 474 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 MIR125B2-201ENST00000385128 89 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 POLR2KP2-201ENST00000438155 177 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.09□□□□□ -2.58
ABCA3Q99758 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.09□□□□□ -2.58
ABCA3Q99758 MTND2P38-201ENST00000522536 667 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 RNU6-88P-201ENST00000606801 100 ntBASIC-1.09□□□□□ -2.58
ABCA3Q99758 RNY4P6-201ENST00000363667 96 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 RPL21P38-201ENST00000418090 167 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 AC133104.1-201ENST00000429100 218 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 SNORD65B-201ENST00000459126 73 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 RNA5SP216-201ENST00000516111 123 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 RNU6-469P-201ENST00000516253 101 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 AP002004.2-201ENST00000531656 154 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.1□□□□□ -2.59
ABCA3Q99758 AP000753.3-201ENST00000604083 169 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 AP000907.4-201ENST00000604143 237 ntBASIC-1.1□□□□□ -2.59
ABCA3Q99758 AC106754.1-201ENST00000562632 1513 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 RNU6-236P-201ENST00000363886 106 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 PIGPP3-201ENST00000425307 415 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.11□□□□□ -2.59
ABCA3Q99758 AC133485.4-201ENST00000561835 220 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 MTND1P8-201ENST00000571424 950 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.11□□□□□ -2.59
ABCA3Q99758 MIR4676-201ENST00000583078 72 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 AC087683.1-201ENST00000591187 441 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
ABCA3Q99758 AP002782.1-201ENST00000623107 614 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 AL078596.1-201ENST00000624856 447 ntBASIC-1.11□□□□□ -2.59
ABCA3Q99758 RNU6-161P-201ENST00000363051 106 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 MIR452-201ENST00000385020 85 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 MTCO2P33-201ENST00000402100 465 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 AL031779.1-201ENST00000415663 330 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 MTND1P14-201ENST00000427400 950 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 AC005562.2-201ENST00000618264 111 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 AL008636.1-201ENST00000625038 1018 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 SNORA1B-201ENST00000362535 133 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 SNORA26-201ENST00000391286 122 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 USP9YP25-201ENST00000457708 443 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 AC144521.1-201ENST00000607148 956 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.12□□□□□ -2.59
ABCA3Q99758 MIR4251-201ENST00000635819 61 ntBASIC-1.12□□□□□ -2.59
ABCA3Q99758 AC243428.1-201ENST00000421099 264 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 AC079354.2-201ENST00000453523 154 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 MTCO3P8-201ENST00000453691 755 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 AC117522.1-201ENST00000509821 380 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 AC091133.4-201ENST00000511142 308 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.13□□□□□ -2.59
ABCA3Q99758 AC026470.2-201ENST00000561492 181 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 SNORD92-201ENST00000585078 85 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 AC121247.2-201ENST00000604776 136 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.13□□□□□ -2.59
ABCA3Q99758 AC012409.4-201ENST00000612923 249 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 ZNF204P-201ENST00000416749 2397 ntBASIC-1.13□□□□□ -2.59
ABCA3Q99758 RNU6-560P-201ENST00000364007 108 ntBASIC-1.14□□□□□ -2.59
ABCA3Q99758 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.14□□□□□ -2.59
ABCA3Q99758 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.14□□□□□ -2.59
ABCA3Q99758 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.14□□□□□ -2.59
ABCA3Q99758 MIR4264-201ENST00000583520 66 ntBASIC-1.14□□□□□ -2.59
ABCA3Q99758 MIR4324-201ENST00000584846 72 ntBASIC-1.14□□□□□ -2.59
ABCA3Q99758 OR4H6P-202ENST00000603819 340 ntBASIC-1.14□□□□□ -2.59
ABCA3Q99758 AC099785.1-201ENST00000605697 437 ntBASIC-1.14□□□□□ -2.59
ABCA3Q99758 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.14□□□□□ -2.59
ABCA3Q99758 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 RNU6-125P-201ENST00000384505 107 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 RNU2-39P-201ENST00000410604 198 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC093303.1-201ENST00000514549 295 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC068587.5-201ENST00000528506 175 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC008608.1-201ENST00000603910 127 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC020891.4-201ENST00000605745 93 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.15□□□□□ -2.59
ABCA3Q99758 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 RNU6-336P-201ENST00000364891 107 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 270.6 ms