Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 AC022616.8-201ENST00000533569 253 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.13□□□□□ -2.07
PKP4Q99569 MIR3945-201ENST00000581853 98 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 AL109918.3-201ENST00000603072 338 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 AC022202.1-201ENST00000613515 211 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 AC091932.3-201ENST00000624223 323 ntBASIC2.13□□□□□ -2.07
PKP4Q99569 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
PKP4Q99569 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.12□□□□□ -2.07
PKP4Q99569 Y_RNA.269-201ENST00000364685 89 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 MIR518A2-201ENST00000384966 87 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 RNU2-54P-201ENST00000410299 190 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 Y_RNA.597-201ENST00000410463 100 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 RNU2-14P-201ENST00000411053 191 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 RNU2-32P-201ENST00000411193 191 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.12□□□□□ -2.07
PKP4Q99569 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.12□□□□□ -2.07
PKP4Q99569 RPL23AP3-201ENST00000453844 468 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.12□□□□□ -2.07
PKP4Q99569 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 RNU6-138P-201ENST00000515952 107 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 RNU6-107P-201ENST00000516643 102 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 Y_RNA.700-201ENST00000516806 100 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 MIR4643-201ENST00000577473 78 ntBASIC2.12□□□□□ -2.07
PKP4Q99569 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.12□□□□□ -2.07
PKP4Q99569 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PKP4Q99569 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PKP4Q99569 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
PKP4Q99569 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PKP4Q99569 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PKP4Q99569 SNORD87-201ENST00000364849 89 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 Y_RNA.418-201ENST00000384029 102 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 RNA5SP504-201ENST00000410676 117 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 Z98742.3-201ENST00000418637 326 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 MTCO1P5-201ENST00000433573 344 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 MRPS10P1-201ENST00000448483 130 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 AC245102.2-201ENST00000448956 180 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 AC090255.1-201ENST00000495779 349 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 AC091959.1-201ENST00000495857 238 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 RNU1-117P-201ENST00000517041 158 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 AP002001.1-203ENST00000534002 267 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 AC130289.1-201ENST00000577321 73 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 AL162424.1-201ENST00000602325 221 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
PKP4Q99569 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
PKP4Q99569 Y_RNA.275-201ENST00000364726 110 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 RNU6-740P-201ENST00000364734 105 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 Y_RNA.785-201ENST00000384290 109 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 SNORA67.2-201ENST00000384300 149 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 MIR1294-201ENST00000408503 142 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 RNU6-1199P-201ENST00000411249 104 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 AL139156.1-201ENST00000412785 841 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.1□□□□□ -2.07
PKP4Q99569 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 TOMM22P2-201ENST00000430735 237 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 NDUFB4P10-201ENST00000452541 359 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.1□□□□□ -2.07
PKP4Q99569 RNU6-155P-201ENST00000516347 100 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 RNU6-966P-201ENST00000516479 104 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 SNORA27.4-201ENST00000516650 95 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 RNU2-12P-201ENST00000517216 168 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.1□□□□□ -2.07
PKP4Q99569 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.1□□□□□ -2.07
PKP4Q99569 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.1□□□□□ -2.07
PKP4Q99569 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.1□□□□□ -2.07
PKP4Q99569 AC006380.1-201ENST00000603598 186 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.1□□□□□ -2.07
PKP4Q99569 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 AC008873.1-201ENST00000625051 138 ntBASIC2.1□□□□□ -2.07
PKP4Q99569 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.09□□□□□ -2.07
PKP4Q99569 UBE2WP1-201ENST00000362030 340 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 U3.8-201ENST00000363675 217 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 Y_RNA.200-201ENST00000364018 102 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PKP4Q99569 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 RNA5SP425-201ENST00000410336 112 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 SRIP3-201ENST00000413200 219 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.09□□□□□ -2.07
PKP4Q99569 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.09□□□□□ -2.07
PKP4Q99569 MTND5P15-201ENST00000434246 349 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 MTND2P29-201ENST00000438595 412 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.09□□□□□ -2.07
PKP4Q99569 RNU5F-4P-201ENST00000516581 114 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 RNU6-1098P-201ENST00000516772 96 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 AL512605.2-201ENST00000592972 256 ntBASIC2.09□□□□□ -2.07
PKP4Q99569 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.08□□□□□ -2.08
PKP4Q99569 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PKP4Q99569 Y_RNA.76-201ENST00000362931 109 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 U8.2-201ENST00000363156 134 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 RNU6-944P-201ENST00000364023 107 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 RNU6-454P-201ENST00000364292 107 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 MIR586-201ENST00000385035 97 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms