Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 Y_RNA.453-201ENST00000384223 109 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 U8.16-201ENST00000391279 133 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 MIR190B-201ENST00000401119 79 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 ELOCP21-201ENST00000412558 336 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 AL139396.1-201ENST00000421137 167 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 EIF1P2-201ENST00000428233 350 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 UQCRBP2-201ENST00000447827 297 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 AC105758.1-201ENST00000506038 399 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 SNORA31.2-201ENST00000516019 134 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 RNU6-947P-201ENST00000516264 106 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 AC125232.2-201ENST00000592457 143 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.17□□□□□ -2.22
CCDC43Q96MW1 RNU6-407P-201ENST00000365280 104 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC43Q96MW1 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 RNU7-87P-201ENST00000459343 62 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 AC091021.1-201ENST00000468051 388 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 RPS29P25-201ENST00000481709 171 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 RNA5SP20-201ENST00000515976 84 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 AL357075.2-201ENST00000614906 189 ntBASIC1.16□□□□□ -2.22
CCDC43Q96MW1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 RNU6-424P-201ENST00000384367 105 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 RNU6-910P-201ENST00000390844 107 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 SNORD115-47-201ENST00000391226 86 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 MTCYBP4-201ENST00000401524 249 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 RPS23P4-201ENST00000487908 423 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 MTND5P5-201ENST00000503764 376 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.15□□□□□ -2.23
CCDC43Q96MW1 RNU2-56P-201ENST00000516826 190 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 MIR5701-3-201ENST00000578890 82 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 MIR5701-1-201ENST00000585138 82 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 MIR5701-2-201ENST00000615634 82 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC43Q96MW1 AC073544.1-201ENST00000600110 1595 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC43Q96MW1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC43Q96MW1 AC005592.1-201ENST00000566527 1640 ntBASIC1.15□□□□□ -2.23
CCDC43Q96MW1 SNORD114-27-201ENST00000363766 70 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 Y_RNA.516-201ENST00000384541 124 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 SNORD41-201ENST00000386967 70 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 RNU11-5P-201ENST00000391216 129 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 AC092989.1-201ENST00000481235 277 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 OR9P1P-201ENST00000496431 281 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 SNORA31.4-201ENST00000516049 129 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC43Q96MW1 AC090049.2-201ENST00000550377 109 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC43Q96MW1 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 AC080078.2-201ENST00000603766 501 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 AC018462.2-201ENST00000605375 395 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 AC005014.2-201ENST00000607795 599 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 U4.5-201ENST00000617137 123 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 MIR3688-2-201ENST00000636963 87 ntBASIC1.14□□□□□ -2.23
CCDC43Q96MW1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC43Q96MW1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU4-79P-201ENST00000362764 141 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU6-700P-201ENST00000391043 107 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 AC018865.2-201ENST00000423631 129 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC43Q96MW1 AC026782.1-201ENST00000512952 449 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU7-12P-201ENST00000516030 62 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU6-917P-201ENST00000516294 104 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RN7SKP49-201ENST00000516675 260 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU7-28P-201ENST00000516759 62 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 RNU6-341P-201ENST00000516973 96 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC43Q96MW1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC43Q96MW1 AC091178.2-201ENST00000584401 117 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
CCDC43Q96MW1 SNORA1B-201ENST00000362535 133 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 SNORA27.1-201ENST00000362604 124 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 RNA5SP361-201ENST00000362686 118 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 RNU6-879P-201ENST00000364328 108 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 SNORA25.9-201ENST00000365087 128 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 Y_RNA.318-201ENST00000365131 97 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 Y_RNA.498-201ENST00000384460 102 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 RNU6-376P-201ENST00000384731 106 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 AL451046.2-201ENST00000403074 277 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC43Q96MW1 PCNPP5-201ENST00000452246 481 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 RNU6-329P-201ENST00000459618 107 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 AC105313.1-201ENST00000509121 353 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC43Q96MW1 MIR3684-201ENST00000579779 74 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 AC104260.1-201ENST00000616660 539 ntBASIC1.12□□□□□ -2.23
CCDC43Q96MW1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC43Q96MW1 RNU6-874P-201ENST00000362390 105 ntBASIC1.11□□□□□ -2.23
CCDC43Q96MW1 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms