Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL159152.1-201ENST00000635019 2587 ntBASIC2.43□□□□□ -2.02
TRIM43Q96BQ3 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 RNU6-23P-201ENST00000363283 107 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 RNU6-324P-201ENST00000363957 106 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 MIR1253-201ENST00000408273 105 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 POLR2KP2-201ENST00000438155 177 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 TRBVB-201ENST00000477100 408 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 HMGB3P17-201ENST00000504195 649 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 AC009127.3-201ENST00000570531 403 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 AC008749.1-201ENST00000597650 306 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 AL590240.4-201ENST00000616908 390 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 U4.1-201ENST00000620349 87 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 U6.115-201ENST00000636045 103 ntBASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.84-201ENST00000363011 104 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 SNORA25.6-201ENST00000364121 118 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 RNU6-290P-201ENST00000365212 101 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 Y_RNA.376-201ENST00000365638 108 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 RNU6-102P-201ENST00000384485 104 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 MIR215-201ENST00000384858 110 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 AL445646.1-201ENST00000431784 216 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 RN7SL297P-201ENST00000483161 293 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 AC037487.3-201ENST00000606668 112 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.15-201ENST00000611544 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.16-201ENST00000613119 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.12-201ENST00000613778 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.9-201ENST00000615427 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.11-201ENST00000616345 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.2-201ENST00000616535 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.3-201ENST00000617785 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.19-201ENST00000618602 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 RNU2-1-201ENST00000618664 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.6-201ENST00000619225 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.5-201ENST00000619465 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 U2.10-201ENST00000620268 191 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM43Q96BQ3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
TRIM43Q96BQ3 SNORD81.1-201ENST00000363064 77 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 SNORD114-6-201ENST00000364393 72 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 SNORA53-201ENST00000391141 249 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 U3.40-201ENST00000408706 208 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 AC108667.1-201ENST00000428618 249 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 RPL23AP3-201ENST00000453844 468 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 HSPE1P25-201ENST00000455484 251 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 MIR4503-201ENST00000582187 83 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM43Q96BQ3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 RNU1-58P-201ENST00000362413 163 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 RNU6-271P-201ENST00000363858 105 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 RNA5SP493-201ENST00000364115 91 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 SNORD115-30-201ENST00000364117 82 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.288-201ENST00000364854 92 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 AL031003.1-201ENST00000404229 172 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 RNU6-1203P-201ENST00000410703 110 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 RNU6-1199P-201ENST00000411249 104 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 AC016909.1-201ENST00000415916 166 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 SNORD65B-201ENST00000459126 73 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 AC010598.1-201ENST00000510378 103 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 HMGB3P3-201ENST00000510526 400 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 SNORA70.12-201ENST00000516084 153 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 SUMO2P18-201ENST00000518873 252 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 MIR3149-201ENST00000584629 83 ntBASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM43Q96BQ3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 RNU6-702P-201ENST00000364982 107 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.396-201ENST00000383949 103 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.452-201ENST00000384202 108 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 SNORA17.3-201ENST00000391159 129 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC060773.1-201ENST00000421698 310 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC024067.1-201ENST00000426199 223 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms