Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.84□□□□□ -1.95
KRT40Q6A162 SUMO2P18-201ENST00000518873 252 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.84□□□□□ -1.95
KRT40Q6A162 AC007336.1-201ENST00000576365 3828 ntBASIC2.84□□□□□ -1.95
KRT40Q6A162 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
KRT40Q6A162 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
KRT40Q6A162 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.84□□□□□ -1.96
KRT40Q6A162 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.84□□□□□ -1.96
KRT40Q6A162 RNU6-746P-201ENST00000384112 109 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 RNU6-125P-201ENST00000384505 107 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
KRT40Q6A162 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.83□□□□□ -1.96
KRT40Q6A162 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.83□□□□□ -1.96
KRT40Q6A162 AC090515.1-201ENST00000465295 476 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 RNU6-406P-201ENST00000516470 107 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 RNU5F-4P-201ENST00000516581 114 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 MIR5692C2-201ENST00000577959 77 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 MIR3133-201ENST00000583157 78 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 RPL17P51-201ENST00000605218 238 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 AC021753.1-201ENST00000635724 168 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 U6.106-201ENST00000636360 105 ntBASIC2.83□□□□□ -1.96
KRT40Q6A162 RNU6-1048P-201ENST00000364054 107 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 Y_RNA.506-201ENST00000384494 102 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 MIR1185-2-201ENST00000408687 86 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 RNA5SP425-201ENST00000410336 112 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 MICF-203ENST00000432679 129 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.82□□□□□ -1.96
KRT40Q6A162 AP005660.1-201ENST00000522972 293 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.82□□□□□ -1.96
KRT40Q6A162 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.82□□□□□ -1.96
KRT40Q6A162 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.82□□□□□ -1.96
KRT40Q6A162 U4.3-201ENST00000621047 82 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 MIR7515-201ENST00000637837 67 ntBASIC2.82□□□□□ -1.96
KRT40Q6A162 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRT40Q6A162 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRT40Q6A162 Z82195.2-201ENST00000612348 18351 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 MIR6073-201ENST00000352083 89 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 Y_RNA.170-201ENST00000363746 110 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 RNU6-234P-201ENST00000365229 104 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 MIR218-1-201ENST00000384999 110 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 AL357139.1-201ENST00000407792 426 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 MIR1283-1-201ENST00000408494 87 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 AC136628.3-201ENST00000521868 290 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.81□□□□□ -1.96
KRT40Q6A162 AC100767.1-201ENST00000528178 123 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 MRPS18CP4-201ENST00000535821 231 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 AC009127.3-201ENST00000570531 403 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 AL078604.3-201ENST00000615580 211 ntBASIC2.81□□□□□ -1.96
KRT40Q6A162 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.81□□□□□ -1.96
KRT40Q6A162 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
KRT40Q6A162 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRT40Q6A162 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.8□□□□□ -1.96
KRT40Q6A162 MIR21-201ENST00000362134 72 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 VTRNA1-1-201ENST00000363120 99 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 Y_RNA.124-201ENST00000363339 93 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 Y_RNA.172-201ENST00000363765 102 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 RNA5SP139-201ENST00000364340 117 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 SNORA68.1-201ENST00000364537 132 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 RNU6-1248P-201ENST00000391096 64 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 FO393413.1-201ENST00000402892 195 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 RNU5E-9P-201ENST00000411164 104 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 AL392103.1-201ENST00000447000 198 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 RNU7-14P-201ENST00000459331 62 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 SEM1P1-201ENST00000506694 209 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 Y_RNA.662-201ENST00000516028 97 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 AC018630.3-201ENST00000542637 96 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 MIR3199-1-201ENST00000582434 88 ntBASIC2.8□□□□□ -1.96
KRT40Q6A162 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
KRT40Q6A162 Y_RNA.164-201ENST00000363709 102 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 Y_RNA.310-201ENST00000365063 113 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 Y_RNA.368-201ENST00000365547 113 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 AL359511.1-201ENST00000402970 211 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 AL355796.1-201ENST00000406706 323 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 MIR1294-201ENST00000408503 142 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.79□□□□□ -1.96
KRT40Q6A162 MTND5P41-201ENST00000517498 206 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 AC010297.1-201ENST00000623948 149 ntBASIC2.79□□□□□ -1.96
KRT40Q6A162 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
KRT40Q6A162 AC134026.1-201ENST00000623249 2239 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 AC010329.5-201ENST00000623497 2174 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 AC080128.1-201ENST00000474389 1917 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 AL157777.2-201ENST00000258070 137 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 SNORA72.4-201ENST00000384174 132 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 RNU6-804P-201ENST00000384286 107 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 U6atac.2-201ENST00000408644 118 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 RNU6-394P-201ENST00000410735 107 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 RNU6-1135P-201ENST00000411083 103 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 Y_RNA.703-201ENST00000516846 111 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 SCARNA3-201ENST00000517097 143 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 RNU6-586P-201ENST00000517265 104 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.78□□□□□ -1.96
KRT40Q6A162 AC105245.1-201ENST00000581934 244 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 MIR1248-201ENST00000629190 106 ntBASIC2.78□□□□□ -1.96
KRT40Q6A162 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.78□□□□□ -1.96
KRT40Q6A162 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
KRT40Q6A162 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms