Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC009248.2-201ENST00000619826 254 ntBASIC0.2□□□□□ -2.38
AP1S1P61966 AC006504.8-201ENST00000621046 635 ntBASIC0.2□□□□□ -2.38
AP1S1P61966 RNU4-20P-201ENST00000365601 151 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.19□□□□□ -2.38
AP1S1P61966 RNU6-348P-201ENST00000384386 107 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 RNY1P4-201ENST00000384595 115 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 RNU6-1067P-201ENST00000384752 107 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
AP1S1P61966 RNA5SP482-201ENST00000391269 118 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 MTCO3P19-201ENST00000415864 321 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 AL606489.2-201ENST00000433886 234 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 MTND4LP16-201ENST00000440828 295 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 RPL30P10-201ENST00000488148 337 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 MTCO1P29-201ENST00000496868 288 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.19□□□□□ -2.38
AP1S1P61966 AF235103.2-201ENST00000525753 346 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.19□□□□□ -2.38
AP1S1P61966 AL133215.3-201ENST00000609801 448 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 MIR7111-201ENST00000619751 72 ntBASIC0.19□□□□□ -2.38
AP1S1P61966 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
AP1S1P61966 RNU6-833P-201ENST00000363486 107 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 RNU6-82P-201ENST00000363970 107 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 RNU6-654P-201ENST00000364373 107 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 MIR891A-201ENST00000401237 79 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 RNU2-70P-201ENST00000410718 179 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 MTCO2P19-201ENST00000427513 598 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.18□□□□□ -2.38
AP1S1P61966 AC018710.1-201ENST00000506509 158 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 AC091885.1-201ENST00000506658 268 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 AP002004.2-201ENST00000531656 154 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 AC027449.1-201ENST00000608890 407 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 AC006435.5-201ENST00000624486 112 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 AC005609.4-201ENST00000625071 447 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
AP1S1P61966 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
AP1S1P61966 MIR103A1-201ENST00000362165 78 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 Y_RNA.151-201ENST00000363566 112 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 SNORD113-7-201ENST00000363762 77 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 Y_RNA.184-201ENST00000363884 108 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 RNU6-793P-201ENST00000384233 104 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 SNORD105-201ENST00000386910 85 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 RNU6-159P-201ENST00000391080 106 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 RNU5A-5P-201ENST00000411054 116 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.17□□□□□ -2.38
AP1S1P61966 AL445567.1-201ENST00000439121 144 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 AC093019.1-201ENST00000443135 252 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 SNORA19.2-201ENST00000516013 114 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
AP1S1P61966 RPL21P9-201ENST00000556149 474 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 AC072046.2-201ENST00000618366 268 ntBASIC0.17□□□□□ -2.38
AP1S1P61966 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
AP1S1P61966 SNORD115-32-201ENST00000364079 82 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 RNU4-66P-201ENST00000365199 138 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 RNU6-163P-201ENST00000384396 106 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 Y_RNA.540-201ENST00000384638 111 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 RNU6-136P-201ENST00000384663 107 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 MIR516B2-201ENST00000385190 85 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 MIR1827-201ENST00000408549 66 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 MIR1298-201ENST00000408783 112 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 MIR1302-7-201ENST00000408841 72 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 RNA5SP95-201ENST00000410319 137 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 RNU6-177P-201ENST00000411257 104 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 AC018865.2-201ENST00000423631 129 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.16□□□□□ -2.38
AP1S1P61966 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.16□□□□□ -2.38
AP1S1P61966 AC114811.1-201ENST00000507207 168 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 RNA5SP20-201ENST00000515976 84 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 MTCO2P4-201ENST00000517968 247 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 AC040904.1-201ENST00000590850 223 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 AC092807.2-201ENST00000609367 243 ntBASIC0.16□□□□□ -2.38
AP1S1P61966 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
AP1S1P61966 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 Y_RNA.179-201ENST00000363844 90 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU4-9P-201ENST00000364951 139 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-407P-201ENST00000365280 104 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-214P-201ENST00000384130 107 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-933P-201ENST00000384424 107 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-376P-201ENST00000384731 106 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 MIR193B-201ENST00000384907 83 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 MIR520C-201ENST00000385005 87 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 MIR140-201ENST00000385282 100 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-1304P-201ENST00000411374 106 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.15□□□□□ -2.39
AP1S1P61966 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.15□□□□□ -2.39
AP1S1P61966 MTND1P22-201ENST00000510572 951 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.15□□□□□ -2.39
AP1S1P61966 RNA5SP401-201ENST00000515920 127 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-107P-201ENST00000516643 102 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-1096P-201ENST00000517089 102 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.15□□□□□ -2.39
AP1S1P61966 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.15□□□□□ -2.39
AP1S1P61966 AC100830.2-201ENST00000581636 240 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 AC120024.3-201ENST00000603167 156 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 AL158063.1-201ENST00000615349 536 ntBASIC0.15□□□□□ -2.39
AP1S1P61966 RNU6-541P-201ENST00000384709 110 ntBASIC0.14□□□□□ -2.39
AP1S1P61966 MIR153-2-201ENST00000385225 87 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms