Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AIMP1P2-201ENST00000425294 312 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 TMSB4XP3-201ENST00000445144 114 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNU1-41P-201ENST00000516161 162 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 RNU1-48P-201ENST00000516400 162 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 AP005660.1-201ENST00000522972 293 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 DEFB131C-201ENST00000528817 165 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.33□□□□□ -2.04
SMAD6O43541 MIR3144-201ENST00000579460 79 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.33□□□□□ -2.04
SMAD6O43541 RNU6-91P-201ENST00000607774 107 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 AL008718.3-201ENST00000610217 321 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 PCGEM1.1-201ENST00000613431 131 ntBASIC2.33□□□□□ -2.04
SMAD6O43541 AL359854.1-201ENST00000614203 1594 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMAD6O43541 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.32□□□□□ -2.04
SMAD6O43541 RNU6-454P-201ENST00000364292 107 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 Y_RNA.329-201ENST00000365209 107 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 RNA5SP240-201ENST00000365355 128 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 RNY1P5-201ENST00000383890 115 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 Y_RNA.398-201ENST00000383952 99 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 RNA5SP475-201ENST00000410568 110 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 RNU6-394P-201ENST00000410735 107 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
SMAD6O43541 BTF3P11-201ENST00000426582 477 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 AC027124.2-201ENST00000428249 105 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 MICF-203ENST00000432679 129 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 snoU13.14-201ENST00000459372 104 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 RNU6-107P-201ENST00000516643 102 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 SCARNA3-201ENST00000517097 143 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.32□□□□□ -2.04
SMAD6O43541 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.32□□□□□ -2.04
SMAD6O43541 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.32□□□□□ -2.04
SMAD6O43541 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
SMAD6O43541 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.32□□□□□ -2.04
SMAD6O43541 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMAD6O43541 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
SMAD6O43541 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.31□□□□□ -2.04
SMAD6O43541 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMAD6O43541 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMAD6O43541 AL596028.1-201ENST00000326971 197 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 SNORD114-19-201ENST00000363072 75 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 SNORD87-201ENST00000364849 89 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 RNU6-1264P-201ENST00000383891 107 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 MIR186-201ENST00000384988 86 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 AL357139.1-201ENST00000407792 426 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 RNU6-1135P-201ENST00000411083 103 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.31□□□□□ -2.04
SMAD6O43541 AL441985.1-201ENST00000457727 251 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 RNU2-12P-201ENST00000517216 168 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 MIR5692C2-201ENST00000577959 77 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 AC005562.2-201ENST00000618264 111 ntBASIC2.31□□□□□ -2.04
SMAD6O43541 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.3□□□□□ -2.04
SMAD6O43541 SNORA18.2-201ENST00000383865 132 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 MIR218-1-201ENST00000384999 110 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 MIR613-201ENST00000385248 95 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 MIR548I2-201ENST00000408348 149 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 U3.40-201ENST00000408706 208 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 RN7SKP223-201ENST00000410582 62 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 RNA5SP504-201ENST00000410676 117 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 RNU5E-9P-201ENST00000411164 104 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.3□□□□□ -2.04
SMAD6O43541 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.3□□□□□ -2.04
SMAD6O43541 AC004386.2-201ENST00000441858 148 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 Y_RNA.637-201ENST00000459424 114 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.3□□□□□ -2.04
SMAD6O43541 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.3□□□□□ -2.04
SMAD6O43541 AC145146.1-201ENST00000496370 254 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 RNU6-436P-201ENST00000516171 114 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.3□□□□□ -2.04
SMAD6O43541 AL391813.1-201ENST00000603098 260 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 TCL6_2.1-201ENST00000615162 119 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
SMAD6O43541 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
SMAD6O43541 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
SMAD6O43541 U3.9-201ENST00000363823 204 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 RNU6-324P-201ENST00000363957 106 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 SNORD113-1-201ENST00000365321 69 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 Y_RNA.441-201ENST00000384123 112 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 Y_RNA.571-201ENST00000384753 98 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 MIR221-201ENST00000385135 110 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 AC112771.1-201ENST00000463581 102 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMAD6O43541 RNU1-117P-201ENST00000517041 158 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.29□□□□□ -2.04
SMAD6O43541 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.29□□□□□ -2.04
SMAD6O43541 MIR5006-201ENST00000583027 110 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 AC006380.1-201ENST00000603598 186 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 AC004832.4-201ENST00000608952 331 ntBASIC2.29□□□□□ -2.04
SMAD6O43541 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMAD6O43541 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SMAD6O43541 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
SMAD6O43541 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.28□□□□□ -2.04
SMAD6O43541 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SMAD6O43541 snoU2_19.1-201ENST00000362361 80 ntBASIC2.28□□□□□ -2.04
SMAD6O43541 RNU6-655P-201ENST00000362858 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms