Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SMARCAL1Q9NZC9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.16-201ENST00000362421 102 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-454P-201ENST00000364292 107 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-702P-201ENST00000364982 107 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 SNORA25B-201ENST00000365507 128 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 RNU6-438P-201ENST00000365561 103 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 SNORD63-201ENST00000384262 68 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.462-201ENST00000384268 102 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 Y_RNA.541-201ENST00000384640 113 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 MIR586-201ENST00000385035 97 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 RNA5SP475-201ENST00000410568 110 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 RNU5A-5P-201ENST00000411054 116 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 AC016717.1-201ENST00000448918 286 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 HSPE1P25-201ENST00000455484 251 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 TRBVB-201ENST00000477100 408 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 MIR4423-201ENST00000580922 80 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 AC011373.1-201ENST00000607270 237 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 AC008873.1-201ENST00000625051 138 ntBASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SMARCAL1Q9NZC9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SMARCAL1Q9NZC9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.230-201ENST00000364348 109 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 SNORD31B-201ENST00000364977 69 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 SNORD14D-201ENST00000384390 87 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.581-201ENST00000391017 97 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 RN7SKP223-201ENST00000410582 62 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-1203P-201ENST00000410703 110 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 RNA5SP270-201ENST00000411361 118 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 HMGB3P17-201ENST00000504195 649 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-496P-201ENST00000516145 99 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 AC091544.4-201ENST00000555268 342 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 MIR4753-201ENST00000585119 83 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 AC104984.5-201ENST00000586878 94 ntBASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SMARCAL1Q9NZC9 U3.8-201ENST00000363675 217 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.331-201ENST00000365267 102 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-418P-201ENST00000384035 107 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.446-201ENST00000384178 104 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 SNORA64-201ENST00000384674 134 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-21P-201ENST00000384710 107 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 MIR300-201ENST00000401138 83 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AL357139.1-201ENST00000407792 426 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC016925.1-201ENST00000458303 298 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 RNU7-57P-201ENST00000459540 60 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.668-201ENST00000516233 93 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC004817.2-201ENST00000561794 651 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AC022441.3-201ENST00000605737 136 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 SNORD113-5-201ENST00000607261 78 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 AP001282.2-201ENST00000616149 309 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SMARCAL1Q9NZC9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 AC010615.1-201ENST00000594254 1764 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 SNORD81.1-201ENST00000363064 77 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-1310P-201ENST00000384153 107 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 RNU2-38P-201ENST00000410856 79 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-1199P-201ENST00000411249 104 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 AC009238.1-201ENST00000442165 424 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 AC009237.6-201ENST00000446969 424 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 TRBV12-1-201ENST00000479785 344 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 SEPT14P8-201ENST00000508026 178 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 AC093259.1-201ENST00000509755 300 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 SNORA4.4-201ENST00000515921 135 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 MIR514B-201ENST00000516774 80 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 SCARNA24.2-201ENST00000516968 130 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 DEFB108E-201ENST00000524692 240 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 MIR3945-201ENST00000581853 98 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 AC006001.4-201ENST00000622243 395 ntBASIC2.06□□□□□ -2.08
SMARCAL1Q9NZC9 MIR410-201ENST00000362222 80 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.237-201ENST00000364439 102 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.288-201ENST00000364854 92 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 RNU6-975P-201ENST00000384296 105 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 Y_RNA.556-201ENST00000384677 113 ntBASIC2.05□□□□□ -2.08
SMARCAL1Q9NZC9 MIR1185-2-201ENST00000408687 86 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms